Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_C01
(837 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 55 2e-09
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 53 1e-08
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 51 4e-08
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 48 4e-07
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 46 1e-06
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 46 2e-06
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 44 4e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 42 2e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 40 9e-05
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 39 2e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 39 2e-04
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 38 3e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 38 5e-04
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 36 0.001
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.53
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 25 2.9
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 5.0
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 24 6.6
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 24 6.6
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 8.7
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 23 8.7
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 55.2 bits (127), Expect = 2e-09
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +3
Query: 264 LEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGR 443
+EAW R + ++G T + P + W+ R G + F ++Q L+GHG F +L ++ G
Sbjct: 856 VEAWQREWSTTTSGSWTRRLI-PNIQPWITRRHGNIEFHMSQFLSGHGFFRSHLHRM-GY 913
Query: 444 EPTAQCHHCADRDEEDTAEHTL 509
P+ C C DE TAEHT+
Sbjct: 914 VPSPVCPACG--DENQTAEHTI 933
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 52.8 bits (121), Expect = 1e-08
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +3
Query: 249 SRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLF 428
SR++ + W ++ G T + P + W+ R G + + +TQ+L+GHGCF YL
Sbjct: 903 SRQASMRQWQNEWSNSLNGRWTYLLI-PDVGAWLDRKHGDVDYFVTQVLSGHGCFRSYLH 961
Query: 429 KIAGREPTAQCHHCADRDEEDTAEHTL 509
+ R +++C C +DE++T +H +
Sbjct: 962 RF-NRASSSRCPAC--KDEDETVDHVM 985
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 51.2 bits (117), Expect = 4e-08
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 270 AWSRRLADPSAGLRTVEAVR--PVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGR 443
AW A P+A V A R P L W+ R G + F L+Q+LTGHG F YL + G
Sbjct: 886 AWDAAAAAPTASRYAVWAHRMIPDLHLWMSRRHGEVDFHLSQVLTGHGYFREYL-HVCGF 944
Query: 444 EPTAQCHHC 470
P+A+C C
Sbjct: 945 APSAECPRC 953
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 48.0 bits (109), Expect = 4e-07
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 QSRRSVLEAWSRRLADPSA-GLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRY 422
++ R + W+ P A GL+T + P + WV R G + F LTQ+LTGHG Y
Sbjct: 867 ETMRRWQDQWTTGAGQPGAPGLKTRRLI-PDINLWVSRKHGEVDFFLTQLLTGHGFLRSY 925
Query: 423 LFKIAGREPTAQCHHCADRDEEDTAEHTL 509
+ E + C C D E+ EH L
Sbjct: 926 FVEKGILEGSPNCPECGDAVED--VEHVL 952
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 46.4 bits (105), Expect = 1e-06
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 243 LQSRRSVLEAWSRRL---ADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCF 413
L+ R+ + W + AD S R + ++ W GR G +TF L Q+L+GHG F
Sbjct: 934 LEERQRTITMWQSQWDAEADTSRYTRWTHRIIRDISAWQGRRHGEMTFHLAQVLSGHGFF 993
Query: 414 GRYLFKIAGREPTAQCHHCADRDEEDTAEHTL 509
YL I G + C CA E A H +
Sbjct: 994 REYL-AINGFTESPDCRSCAGVPE--NAHHAI 1022
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +3
Query: 291 DPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTAQCHHC 470
D S RT A+ P +A W R G + F +TQ L+ HGCF YL K + C C
Sbjct: 853 DCSTKGRTTHALIPNIAAWTSRKHGEVNFYMTQFLSDHGCFRSYLHKYR-HASSPDCPAC 911
Query: 471 ADRDEEDTAEHTL 509
E + EH L
Sbjct: 912 VSIVE--STEHVL 922
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 44.4 bits (100), Expect = 4e-06
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +3
Query: 288 ADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTAQCHH 467
AD S +R V P +A W R G + F L+Q+L+GHG F L ++ G P+ C
Sbjct: 909 ADASRFVRWTHRVIPDIAAWHFRRHGEVNFHLSQVLSGHGFFRDDLCRM-GFTPSPDCIR 967
Query: 468 CADRDEEDTAEHTL 509
C E TAEH +
Sbjct: 968 CTGVPE--TAEHAM 979
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 42.3 bits (95), Expect = 2e-05
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 291 DPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYL 425
D S R V P + DW R G +TF L Q+L+GHG F YL
Sbjct: 949 DASRHTRWTHRVIPSVGDWQSRKHGDMTFHLAQVLSGHGFFRDYL 993
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 39.9 bits (89), Expect = 9e-05
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +3
Query: 246 QSRRSVLEAWSRR----LADPSAG--LRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHG 407
+ R LE W R ++P A R + P + W+ + RG + F L Q+L+GH
Sbjct: 871 EERAVTLEVWQREWDANASNPGASRYARWAHRLIPEVHSWMAQKRGEVDFLLAQILSGHR 930
Query: 408 CFGRYLFKIAGREPTAQCHHC 470
F +L + G P+ +C C
Sbjct: 931 FFREFL-HVCGFAPSPECPAC 950
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 39.1 bits (87), Expect = 2e-04
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +3
Query: 246 QSRRSVLEAWSRRLADPSAGLRTVEAVR------PVLADWVGRDRGCLTFRLTQMLTGHG 407
+ R + + W +AG + VR P + W R G + F L+Q+++GHG
Sbjct: 884 EERETTIAEWQATWDSDAAGHQASGYVRWAHRLIPDIGAWQSRKHGEVNFHLSQIISGHG 943
Query: 408 CFGRYLFKIAGREPTAQCHHCADRDEEDTAEHTLAALL 521
F +YL + + C +C ++AEH + A L
Sbjct: 944 FFRKYLADMKFTS-SPDCPNCP--GVRESAEHAMFACL 978
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 38.7 bits (86), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = +3
Query: 246 QSRRSVLEAWSRRLADPSAGLRTVEAVR------PVLADWVGRDRGCLTFRLTQMLTGHG 407
+ R+ +E W +A R VR P + W R G +TF L+Q+L+GHG
Sbjct: 940 EERQRSMEEWQATWGADAANERASRYVRWAHRVIPDVGSWQSRKHGDVTFHLSQVLSGHG 999
Query: 408 CFGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTL 509
F +L G + T+ C C E +AEH +
Sbjct: 1000 FFREHL---CGMQLTSSPDCTRCPGVAE--SAEHAM 1030
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 38.3 bits (85), Expect = 3e-04
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +3
Query: 246 QSRRSVLEAWSRRLADPSAG-----LRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGC 410
+ + + L+ W ++ D +A LR P + W GR G + F L+Q+L+GH
Sbjct: 877 EEKETSLQLWQQQWDDVAANNTSRYLRWAHRQVPDVRLWTGRKHGEVDFYLSQVLSGHAF 936
Query: 411 FGRYLFKIAGREPTAQCHHCA 473
+L + G P+ C CA
Sbjct: 937 VHEFL-HVFGFAPSPDCPRCA 956
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.5 bits (83), Expect = 5e-04
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +3
Query: 246 QSRRSVLEAWSRRL-ADPSAG-----LRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHG 407
+ R+ +E W AD +A +R V P + W R+ G +TF L+Q+L+GHG
Sbjct: 880 EERQRTIEEWQTTWDADAAADNASRYVRWAHLVIPDVGAWQLRNHGEVTFHLSQVLSGHG 939
Query: 408 CFGRYLFKIAGREPTAQCHHC 470
YL K+ A C C
Sbjct: 940 FLREYLNKMRFTSSPA-CPRC 959
Score = 25.0 bits (52), Expect = 2.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 305 AGRRVRQAARPRLQHGPPRLEPP 237
A RRV+ + R R Q PR +PP
Sbjct: 212 AARRVKLSQRNRSQQRSPRRDPP 234
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 36.3 bits (80), Expect = 0.001
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +3
Query: 252 RRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFK 431
R + +E W R + G T + P + W+ R G + F L+Q L+ HG + L +
Sbjct: 847 RVTTMERWQREWDESVHGRWTYRLI-PDVNRWISRRFGGVDFFLSQFLSSHGFYAYQLHR 905
Query: 432 IAGREPTAQCHHCADRDEEDTAEHTL 509
+ + C C +E + AEHT+
Sbjct: 906 MQ-LTGSPLCDAC---EEPEDAEHTI 927
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.5 bits (58), Expect = 0.53
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 341 RENRADRLDGTEAGRRVRQAARPRLQHGPPRLEPPRSN 228
R++R +D + + +Q + P+ PRL PP SN
Sbjct: 296 RDSRGGGVDAAKKQHQQQQRSSPQPPEKMPRLNPPSSN 333
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 25.0 bits (52), Expect = 2.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 513 RPMCVPLCLPRRGQRSGGT 457
RP+C+PL P+R + GT
Sbjct: 225 RPICLPLAEPQRSRNRVGT 243
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 24.2 bits (50), Expect = 5.0
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 133 QSYNYEQGNQRHYQQTQKEAWVALTAAYNAKCGSFPKQKEQ 11
Q +Q Q+ QQ Q++ W + ++ P+Q++Q
Sbjct: 215 QQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQPQQQQQ 255
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 23.8 bits (49), Expect = 6.6
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 54 PTMPSVAPSPSR 19
PT+PS +PSP+R
Sbjct: 169 PTIPSASPSPTR 180
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 23.8 bits (49), Expect = 6.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 480 DEEDTAEHTLAALLWD 527
D E+TAE+ LA WD
Sbjct: 1124 DREETAEYMLAVEAWD 1139
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.4 bits (48), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 582 PRVVATMLGSEASXKAMLDFC 644
PR++ + G E S KA+ FC
Sbjct: 402 PRIIRSDQGGEYSNKALRKFC 422
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 23.4 bits (48), Expect = 8.7
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +3
Query: 411 FGRYLFKIAGREPTAQCHHCADRDEE 488
+G + G++ +++CH CA+ E
Sbjct: 220 YGHTAARCHGKDRSSKCHRCAEDKHE 245
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,468
Number of Sequences: 2352
Number of extensions: 15196
Number of successful extensions: 87
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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