Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_B18
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB020634-1|BAA74850.2| 1608|Homo sapiens KIAA0827 protein protein. 32 3.2
D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein. 31 5.6
BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage ... 31 5.6
BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein. 31 5.6
AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage... 31 5.6
AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage... 31 5.6
AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage ... 31 5.6
AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage ... 31 5.6
AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage ... 31 5.6
AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein. 31 5.6
AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila... 31 5.6
AB065803-1|BAC06022.1| 314|Homo sapiens seven transmembrane hel... 31 7.5
>AB020634-1|BAA74850.2| 1608|Homo sapiens KIAA0827 protein protein.
Length = 1608
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 648 PWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRP 541
PWSSPS + ++ PS R R P SRRRP
Sbjct: 11 PWSSPSTSPSFPRSSAQWKSLPSRRRQRQPPSRRRP 46
>D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1222 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1279
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1280 KTPEPVVPTA-PELRPSTSTDRP 1301
>BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1278
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1279 KTPEPVVPTA-PELRPSTSTDRP 1300
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -1
Query: 699 PTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNP--SSCRGRWPQSRRRPDCLRT 526
PT +++RGR + + P V T AS STD P S R + R+ ++T
Sbjct: 1469 PTSQATRGRTDRSSVKTP--ETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKT 1526
Query: 525 CPLCQTS*PARRDQSTADDP 466
+ PA + ++ D P
Sbjct: 1527 PETVVPAAPALQPSTSTDQP 1546
>BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1222 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1279
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1280 KTPEPVVPTA-PELRPSTSTDRP 1301
>AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1278
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1279 KTPEPVVPTA-PELRPSTSTDRP 1300
>AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 1244
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 611 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 668
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 669 KTPEPVVPTA-PELRPSTSTDRP 690
>AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1278
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1279 KTPEPVVPTA-PELRPSTSTDRP 1300
>AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1278
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1279 KTPEPVVPTA-PELRPSTSTDRP 1300
>AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNP--SSCRGRWPQSRRRPDCL 532
+ PT +++RGR+ + + P P V T S STD P S + + R+ +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTSQATRGRKNRSSV 1278
Query: 531 RTCPLCQTS*PARRDQSTADDP 466
+T + P R ++ D P
Sbjct: 1279 KTPETVVPTAPELRPSTSTDRP 1300
>AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1278
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1279 KTPEPVVPTA-PELRPSTSTDRP 1300
>AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila
photoreceptor protein calphotin protein.
Length = 2089
Score = 31.1 bits (67), Expect = 5.6
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 705 TRPTKESSRGRRTSTHIAIPWSSPSVDTNASAVASVSTDNPSSCRGRWPQSRRRPD--CL 532
+ PT +++RGR+ + + P P V T S STD P + + +R R + +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTP--EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSV 1278
Query: 531 RTC-PLCQTS*PARRDQSTADDP 466
+T P+ T+ P R ++ D P
Sbjct: 1279 KTPEPVVPTA-PELRPSTSTDRP 1300
>AB065803-1|BAC06022.1| 314|Homo sapiens seven transmembrane helix
receptor protein.
Length = 314
Score = 30.7 bits (66), Expect = 7.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 175 PSMSVPMEVEDAVASTLATPFAQPIIFASKSKAQK 279
P M++PM+ ++ +T+ TP PII++ +++ K
Sbjct: 261 PFMTLPMDTTISINNTVITPMLNPIIYSLRNQEMK 295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,423,935
Number of Sequences: 237096
Number of extensions: 2559653
Number of successful extensions: 7837
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7835
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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