Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_FL5_A19
         (849 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    27   0.22 
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    27   0.22 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    24   1.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    24   1.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   8.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   8.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   8.2  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 223 STVATPFPSFMASQNNDRSPMTNNRTDKTF 134
           +TV  P PSF  S+N D    T++  D T+
Sbjct: 28  NTVLQPRPSFELSKNGDEWTFTSSSGDNTY 57


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 223 STVATPFPSFMASQNNDRSPMTNNRTDKTF 134
           +TV  P PSF  S+N D    T++  D T+
Sbjct: 30  NTVLQPRPSFELSKNGDEWTFTSSSGDNTY 59


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 387 HSCRPSPRISSQSCMIDSSQCSRMIRL 307
           H C P+PRI+S+S ++ S  C   ++L
Sbjct: 45  HLCLPAPRINSKSPLL-SCACPDGLKL 70


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 387 HSCRPSPRISSQSCMIDSSQCSRMIRL 307
           H C P+PRI+S+S ++ S  C   ++L
Sbjct: 45  HLCLPAPRINSKSPLL-SCACPDGLKL 70


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 188 CHKRWERSCHRGRTGHK 238
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,079
Number of Sequences: 438
Number of extensions: 4324
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)