Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_FL5_A12
(906 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 70 3e-14
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 66 3e-13
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 66 5e-13
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 65 7e-13
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 7e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 59 6e-11
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 51 2e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.025
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 29 0.044
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 8.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 8.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 69.7 bits (163), Expect = 3e-14
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Frame = +2
Query: 83 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 241
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 242 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTAGDYAL-RAR 415
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 416 VSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 559
+ G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 66.5 bits (155), Expect = 3e-13
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Frame = +2
Query: 179 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERVWR 352
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + ++VW+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 353 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTF 520
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 521 KFGSRMHNSDEMDFVI--DKRIYSM---FESGAW 607
KFGS N D++ + +K + ++SG W
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTW 201
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 66.1 bits (154), Expect = 4e-13
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Frame = +2
Query: 53 FCYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHAN 220
F + +LL C ++ T+L + L YD P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 221 IRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERVWRPDVVLLNAAATT--- 388
+ S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQ 141
Query: 389 AGDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G V ++GSVS + + + +WP D C FGS +H+ +E++ +
Sbjct: 142 TGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFL 201
Query: 569 DKRIYSM 589
DK+ + M
Sbjct: 202 DKKGFHM 208
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 65.7 bits (153), Expect = 5e-13
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Frame = +2
Query: 101 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 259
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 260 LQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAA-ATTAGDYALRARVSNNGS 433
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 434 VSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 559
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 65.3 bits (152), Expect = 7e-13
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Frame = +2
Query: 128 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 292
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 293 WNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKHLD 457
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 458 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 559
+ + ++ +P D Q+C KFGS +N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 63.7 bits (148), Expect = 2e-12
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Frame = +2
Query: 128 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 292
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 293 WNAGEWGCSTWL-VSSERVWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKHLDIST 466
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 467 PISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 559
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Frame = +2
Query: 128 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 292
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 293 WNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKHLDIST 466
WN E+G L ++ ++W+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 467 PISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
+ + +P D Q C KFGS ++ +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Frame = +2
Query: 128 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 292
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 293 WNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKHLDIST 466
WN E+G L ++ ++W+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 467 PISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
+ + +P D Q C KFGS ++ +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ ++W+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 62.5 bits (145), Expect = 5e-12
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Frame = +2
Query: 71 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 229
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 230 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERVWRPDVVLLNAAATTAGDYAL 406
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 407 ----RARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 559
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 62.1 bits (144), Expect = 7e-12
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 274
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 275 IDKRLSWNAGEWGCSTWLVSSERVWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 445
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 446 KHLDISTPISMQLDNWPNDMQTCTFKFGS 532
L I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ ++W+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ ++W+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Frame = +2
Query: 128 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 292
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 293 WNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKHLD 457
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 458 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 559
+ S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ ++W+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ ++W+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA- 391
++ E + A L++ W+D L WN E+G L ++ ++W+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 392 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 568
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.8 bits (136), Expect = 6e-11
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Frame = +2
Query: 59 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 223
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 224 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERVWRPDVVLLNAAATTA-GD 397
E + L++ W D + WN ++G L + R+W+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 398 YALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR 577
Y V NNG+ ++ + + + +P D Q C KFGS ++ ++D +
Sbjct: 124 YPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDE 183
Query: 578 ----IYSMFESGAW 607
I S +G W
Sbjct: 184 AGGDISSFITNGEW 197
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Frame = +2
Query: 182 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERVWRPD 358
+V L+LH ++ E + + W D L WNA E+ G V RVWRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 359 VVLLNAAATTAGDYALRARV--SNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGS 532
+L N A + V S+ G V W+ H + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 533 RMHNSDEMD 559
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 58.0 bits (134), Expect = 1e-10
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Frame = +2
Query: 101 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 265
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 266 MNWIDKRLSWNAGEW-GCSTWLVSSERVWRPDVVL--LNAAATTAGDYALRARVSNNGSV 436
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 437 SWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 556
+ + WP D+ CT S H S+E+
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.8 bits (116), Expect = 2e-08
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +2
Query: 116 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 280
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 281 KRLSWNAGEWGCSTWLVSSERVWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKH 451
RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 452 LDISTPISMQLDNWPNDMQTCTFKFGS 532
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +2
Query: 128 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 286
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 287 LSWN--AGEWGCSTWLVSSERVWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKH 451
L +N G T L + RVW PD+ N + + R+ NGSV +
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 452 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 565
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Frame = +2
Query: 128 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 286
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 287 LSWN--AGEWGCSTWLVSSERVWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKH 451
L +N G T L + RVW PD+ N + + R+ NGSV +
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 452 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 565
+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 274
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 275 IDKRLSWNAGEWGCSTWLVSSE---RVWRPDVVLLNAA------ATTAGDYALRARVSNN 427
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 428 GSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGS 532
GS++ L I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 3e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 274
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 275 IDKRLSWNAGEWGCSTWLVSSE---RVWRPDVVLLNAA------ATTAGDYALRARVSNN 427
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 428 GSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGS 532
GS++ L I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +2
Query: 131 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 298
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 299 AGEWGCSTWLVSSERVWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKHLDISTP 469
E + +E++W PD N + D R R+S +GSV++ +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 470 ISMQLDNWPNDMQTCTFKFGS 532
M L +P D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 3e-04
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Frame = +2
Query: 104 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 265
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 266 MNWIDKRLSW--NAGEWGCSTWLVSSERVWRPDVVLLNAAATTAGDYALRAR---VSNNG 430
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 431 SVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 565
++ ++ L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.9 bits (79), Expect = 5e-04
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +2
Query: 272 WIDKRLSWNAGEWGCSTWLVSSE---RVWRPDVVLLNAA------ATTAGDYALRARVSN 424
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 425 NGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFGS 532
+GS++ L I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.1 bits (77), Expect = 9e-04
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 104 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 268
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 269 NWIDKRLSW-NAGEWGCSTWLVSSERVWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 439
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 440 WIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 565
++ + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.1 bits (77), Expect = 9e-04
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 104 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 268
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 269 NWIDKRLSW-NAGEWGCSTWLVSSERVWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 439
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 440 WIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 565
++ + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.1 bits (77), Expect = 9e-04
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 104 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 268
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 269 NWIDKRLSW-NAGEWGCSTWLVSSERVWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 439
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 440 WIKHLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 565
++ + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.002
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 338 ERVWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKHLDISTPISMQLDNWPNDMQ 508
+ +WRPD NA + T + + + ++ ++ L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 509 TCTFKFGSRMHNSDEMDFVID 571
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.025
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Frame = +2
Query: 182 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERVWRP 355
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 356 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKFG 529
D ++ R+ NG+V+++ + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 530 SRMHNSDEMDFV 565
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.5 bits (63), Expect = 0.044
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 344 VWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTC 514
+W P V + N ++A T + + + +G V L + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 515 TFKFGSRMHNSDEM 556
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 124 GQ*CCVFAFCRTSYSTSEEKXVTE 53
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 8.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 627 WTDPSHPHAP 598
WT P+ PH+P
Sbjct: 444 WTTPTTPHSP 453
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 8.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +3
Query: 600 ERGDVTDLSSAXQSQDRGEVEARRGNVPRCXFRKTRP 710
ER L + + RGE EA G + R RP
Sbjct: 75 ERNITIKLDTRAEDSTRGEQEANLGYTNKMSTRGKRP 111
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 325 PSAAAPFPCVPTQS 284
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,877
Number of Sequences: 438
Number of extensions: 5433
Number of successful extensions: 95
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -