Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P24
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 118 5e-27
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 81 1e-15
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 80 2e-15
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 71 8e-13
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 62 4e-10
12_02_0592 + 20868884-20868954,20869091-20869216,20869554-208698... 32 0.46
02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 30 1.9
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271... 30 2.5
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 3.3
01_01_0065 + 511840-512502 29 3.3
09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135 29 5.7
12_01_0590 - 4813764-4814401,4814785-4814872,4815176-4815376,481... 28 7.5
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 28 7.5
07_03_0190 + 14893243-14893582,14893684-14893808 28 9.9
06_01_0917 - 7077934-7080339 28 9.9
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 118 bits (284), Expect = 5e-27
Identities = 50/102 (49%), Positives = 74/102 (72%)
Frame = -3
Query: 698 SDPARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVI 519
S PA+ GK + +DD FHQCV L++F +E ++SF+PPDGEFELM+YR T+ ++LPFRV+
Sbjct: 237 SRPAKSGK-TIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVL 295
Query: 518 PLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTXR 393
P ++E+GRT+ME+ V +KS F + + VK+P P T +
Sbjct: 296 PTIKELGRTRMEINVKVKSVFGAKMFALGVVVKVPVPKQTAK 337
Score = 105 bits (252), Expect = 4e-23
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = -1
Query: 370 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLET-DTKKKWTRPPISMGFEVP-FAPS 197
GKAKY AS +++VWKI++ G E +SAE+EL+ T KK W RPPI M F+VP F S
Sbjct: 345 GKAKYNASIDSLVWKIRKFPGQTEATMSAEVELISTMGEKKSWNRPPIQMEFQVPMFTAS 404
Query: 196 GFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 83
G +VR+LKV+E S ++ ++WVRYI R+G YE RC
Sbjct: 405 GLRVRFLKVWEK----SGYNTVEWVRYITRAGSYEIRC 438
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/94 (38%), Positives = 58/94 (61%)
Frame = -3
Query: 689 ARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLV 510
A GK + +DD +FHQCV+L++FE + +ISFIPPDG F+LM YR + + V +
Sbjct: 229 ATKGK-AIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQI 287
Query: 509 REVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTP 408
+ R+++E+ V +S FK +E+++P P
Sbjct: 288 EKHSRSRIELMVKARSQFKERSTATNVEIEVPVP 321
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = -1
Query: 370 GKAKYKASENAIVWKIKRMAGMKETQLSAEIEL--LETDTKKKWTRPPISMGFEVP-FAP 200
G A Y +A+VWK+K G K+ AE L + + + PI + FE+P F
Sbjct: 334 GSAAYAPERDAMVWKVKSFPGGKDYMCRAEFSLPSITAEEAAPEKKAPIRVKFEIPYFTV 393
Query: 199 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 86
SG +VRYLK+ E S + + WVRYI +G YE R
Sbjct: 394 SGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 427
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = -3
Query: 662 IDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKME 483
+DD +FHQCV+L++FE + +ISFIPPDG F+LM YR + + V V + R++++
Sbjct: 212 LDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSRSRIQ 271
Query: 482 VKVVLKSNFKPSLLGQKIEVKIPTP 408
+ V +S FK +E+++P P
Sbjct: 272 ITVKTRSQFKERSTATNVEIEVPVP 296
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = -1
Query: 370 GKAKYKASENAIVWKIKRMAGMKETQLSAEIEL--LETDTKKKWTRPPISMGFEVP-FAP 200
G A Y +A+VWKIK G KE AE L + ++ + PI + FE+P F
Sbjct: 309 GSAAYAPERDAMVWKIKSFPGGKEYMCRAEFSLPSITSEDGMPEKKAPIRVKFEIPYFTV 368
Query: 199 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 86
SG +VRYLK+ E S + + WVRYI +G YE R
Sbjct: 369 SGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 402
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 71.3 bits (167), Expect = 8e-13
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = -3
Query: 680 GKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREV 501
G V++DDC FH+ V L F+ + ++ IPPDGEF +M YR T++ PFRV L+ E
Sbjct: 250 GGGAVILDDCNFHESVHLDSFDIDRTLHLIPPDGEFAVMNYRITQEFKPPFRVTALIEEA 309
Query: 500 GRTKM 486
G +++
Sbjct: 310 GPSRI 314
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = -3
Query: 665 VIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIP-LVREVGRTK 489
+I+D +FH CV+ +E+ +SF+PPDG+FELM YR K + P V P L + G +
Sbjct: 235 IINDVRFHPCVRFRPWESNQILSFVPPDGQFELMSYRVKKLKTTPIYVKPQLTSDSGNCR 294
Query: 488 MEVKVVLKSNFKPSLLGQKIEVKIP 414
+ V V +K++ ++ ++ ++P
Sbjct: 295 VNVMVGIKNDPGKTIDSITVQFRLP 319
>12_02_0592 +
20868884-20868954,20869091-20869216,20869554-20869862,
20870017-20870300,20870410-20871305,20871586-20871642,
20872293-20872340,20873046-20873114
Length = 619
Score = 32.3 bits (70), Expect = 0.46
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -3
Query: 662 IDDCQFHQCVKLSK-FETEHSISFIPPDGEFELMRYRTTKDISLP---FRVIPLVREVGR 495
++ FH CV+ S+ + ++ F PP G F LM Y+ + ++ P F + +V E
Sbjct: 359 VEVSSFHHCVQASEPTNDKQTLIFQPPLGNFVLMHYQASCNMDPPVKGFYQLSMVSE-NE 417
Query: 494 TKMEVKVVLKSNFKPSLLGQKIEVKIPTP 408
K+ L +K L + V +P P
Sbjct: 418 GAFLFKLRLMEGYKSPFLMEFCMVTMPFP 446
>02_03_0084 -
15041261-15041437,15041625-15041765,15042857-15042946,
15043111-15043201,15043953-15044155,15045361-15045438,
15045535-15045651,15046111-15046161,15046405-15046500,
15046726-15046742,15046938-15047064,15050585-15050681,
15051565-15051638,15051910-15051993,15052099-15052290,
15054191-15054319,15055607-15055639,15055747-15055843,
15055940-15055990,15057494-15057564,15058305-15058455,
15058625-15058703,15059265-15059346,15060335-15060335,
15060565-15060620,15060969-15061018,15061511-15061580
Length = 834
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 613 LNIPSPSYHRTESLSS*GIAPQKTYLCRFASSRSCGRWAAPR 488
+N PSPS+H SS +P S R+ G WA PR
Sbjct: 620 MNDPSPSFHGLPMSSSVRTSPAHQPAHSMRSRRTGGTWARPR 661
>11_06_0713 +
26524984-26525276,26526008-26526434,26526550-26527171,
26528059-26528099,26528181-26528249,26528565-26528665,
26529300-26529378,26529955-26530053,26530129-26530197,
26530326-26530375,26530482-26530548,26531031-26531125,
26534469-26534856
Length = 799
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 370 PSSKSVAPRLVFSGVGIFTSIFCPSREGLKLLFSTTLTSILVRPTSRTSGMTRNGRD 540
PSS +L S G+ + C S++ L+ ++ +T++ R T+R + G++
Sbjct: 201 PSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAITSRITNLATRVTNRVRSRVKTGQN 257
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 82 STWSRRVRSVRCSAPT**RHGPSNSVSVQTPSDSGP*IRRVQRELRTPWRWAGASTSSW- 258
STW R ++ + P P + QTPS GP R + T W GA ++W
Sbjct: 1260 STWERE-DELKSAHPHLFTRPPDGEIIWQTPSTKGPISGREVKSAETNW---GAIATAWP 1315
Query: 259 CRSRGAQSRQTA 294
R R A+ TA
Sbjct: 1316 SRWRLAEGNVTA 1327
>01_01_0065 + 511840-512502
Length = 220
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/92 (27%), Positives = 38/92 (41%)
Frame = -3
Query: 656 DCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVK 477
DC H S+ T + + + + R+ T+ D ++ + IP V V R KM+
Sbjct: 78 DCN-HSIALASRLVTH--MELMAMEATIHVDRWLTSTDAAVRLQGIPAV--VWRYKMDAV 132
Query: 476 VVLKSNFKPSLLGQKIEVKIPTPLNTXRGATD 381
VV N + LL + TPL A D
Sbjct: 133 VVWLGNARKKLLDASADCHAVTPLLAVAAAVD 164
>09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135
Length = 485
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 220 TPWRWAGASTSSWCRSRGAQSR 285
TP A STS WCRSRG R
Sbjct: 377 TPISSAQQSTSIWCRSRGGNRR 398
>12_01_0590 -
4813764-4814401,4814785-4814872,4815176-4815376,
4816803-4816830,4817136-4817339,4817352-4819136,
4820358-4821139
Length = 1241
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 558 IPHELKLSVRWYEGDGMFSFELAQLHALVELTVVNDHYWLPXASRITV 701
I H++KL + G GM+ E +LH EL++ +D LP S++ +
Sbjct: 594 ISHDVKLVLPSQLG-GMWHLETIELHTSEELSIPSDIVSLPHLSQLFI 640
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 400 PXGVQLICLKGKAKYKASENAIVWKIKRM 314
P ++++ +KG++ K S N I+W KR+
Sbjct: 52 PHVIEVLRIKGRSNMKYSINFIIWDFKRL 80
>07_03_0190 + 14893243-14893582,14893684-14893808
Length = 154
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 314 GGHEGDPAVCRD*APRD-RHQEEVDAPAHLHGVRSSLCTLRIQGP 183
GG P + R PRD R +DAP+ R++ CT R + P
Sbjct: 55 GGPRRWPGLSRTSPPRDLRRSGLIDAPSTTSTTRTARCTSRSEPP 99
>06_01_0917 - 7077934-7080339
Length = 801
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 305 HARHAFDLPHDSVLRGFILRFPLQANQL 388
H LP D++LRG + RFP +A L
Sbjct: 223 HPEEVAGLPVDAILRGSVRRFPDEAGAL 250
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,707,238
Number of Sequences: 37544
Number of extensions: 503211
Number of successful extensions: 1506
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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