Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P24
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 200 9e-52
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 200 9e-52
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 200 9e-52
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 84 1e-16
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 77 2e-14
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 76 3e-14
Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 50 3e-06
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 31 0.96
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF016685-9|AAG24149.1| 330|Caenorhabditis elegans Seven tm rece... 28 6.8
Z93379-10|CAB07594.1| 508|Caenorhabditis elegans Hypothetical p... 28 8.9
Z92830-17|CAB07364.1| 508|Caenorhabditis elegans Hypothetical p... 28 8.9
Z75548-4|CAA99912.1| 117|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z49125-4|CAA88936.1| 644|Caenorhabditis elegans Hypothetical pr... 28 8.9
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 28 8.9
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 28 8.9
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 200 bits (488), Expect = 9e-52
Identities = 92/106 (86%), Positives = 97/106 (91%), Gaps = 2/106 (1%)
Frame = -1
Query: 394 GVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDT--KKKWTRPPISMG 221
GVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAEI+LL T KKKW RPP+SM
Sbjct: 336 GVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMN 395
Query: 220 FEVPFAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 83
FEVPFAPSG KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 396 FEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 441
Score = 176 bits (428), Expect = 2e-44
Identities = 80/99 (80%), Positives = 88/99 (88%)
Frame = -3
Query: 695 DPARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIP 516
DP + + V IDDCQFHQCVKL+KFETEH+ISFIPPDGE+ELMRYRTTKDI LPFRVIP
Sbjct: 236 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKDIQLPFRVIP 295
Query: 515 LVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNT 399
LVREV R KMEVKVV+KSNFKPSLL QK+EV+IPTP NT
Sbjct: 296 LVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNT 334
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 200 bits (488), Expect = 9e-52
Identities = 92/106 (86%), Positives = 97/106 (91%), Gaps = 2/106 (1%)
Frame = -1
Query: 394 GVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDT--KKKWTRPPISMG 221
GVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAEI+LL T KKKW RPP+SM
Sbjct: 330 GVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMN 389
Query: 220 FEVPFAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 83
FEVPFAPSG KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 390 FEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 435
Score = 176 bits (428), Expect = 2e-44
Identities = 80/99 (80%), Positives = 88/99 (88%)
Frame = -3
Query: 695 DPARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIP 516
DP + + V IDDCQFHQCVKL+KFETEH+ISFIPPDGE+ELMRYRTTKDI LPFRVIP
Sbjct: 230 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKDIQLPFRVIP 289
Query: 515 LVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNT 399
LVREV R KMEVKVV+KSNFKPSLL QK+EV+IPTP NT
Sbjct: 290 LVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNT 328
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 200 bits (488), Expect = 9e-52
Identities = 92/106 (86%), Positives = 97/106 (91%), Gaps = 2/106 (1%)
Frame = -1
Query: 394 GVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDT--KKKWTRPPISMG 221
GVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAEI+LL T KKKW RPP+SM
Sbjct: 336 GVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMN 395
Query: 220 FEVPFAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 83
FEVPFAPSG KVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 396 FEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 441
Score = 176 bits (428), Expect = 2e-44
Identities = 80/99 (80%), Positives = 88/99 (88%)
Frame = -3
Query: 695 DPARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIP 516
DP + + V IDDCQFHQCVKL+KFETEH+ISFIPPDGE+ELMRYRTTKDI LPFRVIP
Sbjct: 236 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGEYELMRYRTTKDIQLPFRVIP 295
Query: 515 LVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNT 399
LVREV R KMEVKVV+KSNFKPSLL QK+EV+IPTP NT
Sbjct: 296 LVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNT 334
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 84.2 bits (199), Expect = 1e-16
Identities = 40/87 (45%), Positives = 54/87 (62%)
Frame = -3
Query: 668 VVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTK 489
V ++D +FHQCV+LS+F++E +ISFIPPDGEFELM YR T + V V ++
Sbjct: 234 VELEDIKFHQCVRLSRFDSERTISFIPPDGEFELMSYRLTTQVKPLIWVEAAVERHAHSR 293
Query: 488 MEVKVVLKSNFKPSLLGQKIEVKIPTP 408
+E V KS FK + +EV IP P
Sbjct: 294 VEYMVKAKSQFKRQSVANHVEVIIPVP 320
Score = 68.5 bits (160), Expect = 5e-12
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = -1
Query: 370 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 194
G AKY NAIVW I+ G +E + + L +++ RPPI++ FE+P + SG
Sbjct: 333 GTAKYVPELNAIVWSIRSFPGGREYIMRSSFMLPSIGSEELEGRPPINVKFEIPYYTTSG 392
Query: 193 FKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 86
+VRYLK+ E S + + WVRY+ ++G Y+ R
Sbjct: 393 LQVRYLKIIEK----SGYQALPWVRYVTQNGDYQMR 424
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = -1
Query: 370 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 194
G KY ++A VW IK G KE L+A + L +++ RPPI + FE+P F SG
Sbjct: 329 GSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSG 388
Query: 193 FKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 86
+VRYLK+ E S + + WVRYI ++G YE R
Sbjct: 389 IQVRYLKIIEK----SGYQALPWVRYITQNGEYEMR 420
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = -3
Query: 668 VVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTK 489
V ++D +FHQCV+LS+F+T+ +ISFIPPDG FELM YR T + + + ++
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSYRLTTVVKPLIWIETSIERHSHSR 289
Query: 488 MEVKVVLKSNFKPSLLGQKIEVKIPTP 408
+ + KS FK +E+ IP P
Sbjct: 290 VSFIIKAKSQFKRRSTANNVEIIIPVP 316
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 75.8 bits (178), Expect = 3e-14
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = -1
Query: 370 GKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSG 194
G KY ++A VW IK G KE L+A + L +++ RPPI + FE+P F SG
Sbjct: 329 GSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSG 388
Query: 193 FKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 86
+VRYLK+ E + + + WVRYI ++G YE R
Sbjct: 389 IQVRYLKIIEKR----GYQALPWVRYITQNGEYEMR 420
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = -3
Query: 668 VVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTK 489
V ++D +FHQCV+LS+F+T+ +ISFIPPDG FELM YR T + + + ++
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSYRLTTVVKPLIWIETSIERHSHSR 289
Query: 488 MEVKVVLKSNFKPSLLGQKIEVKIPTP 408
+ + KS FK +E+ IP P
Sbjct: 290 VSFIIKAKSQFKRRSTANNVEIIIPVP 316
>Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical
protein K11D2.3b protein.
Length = 58
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -1
Query: 241 RPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 86
RPPI + FE+P F SG +VRYLK+ E S + + WVRYI ++G YE R
Sbjct: 8 RPPIKVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGEYEMR 56
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = -3
Query: 665 VIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKD--ISLPFRVIPLVR-EVGR 495
++DD FH CV+ ++E E +SF+PPDG F L+ Y +++P V ++ +
Sbjct: 227 LLDDVSFHPCVRYKRWENEKVLSFVPPDGNFRLLSYHIAAQNMVAIPIYVRQVISLKPNA 286
Query: 494 TKMEVKVVLKSNFKPSLLGQKIEVKIP 414
K+++ V K + L +E+ +P
Sbjct: 287 GKLDLTVGPKLSMGKVLEDVVLEITMP 313
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -3
Query: 650 QFHQCVKLSKFETEHSISFIPPDG-EFELMRYRTTKDISL-PFRVIPLVREVGRTKMEVK 477
+FH V +F+ E I+F PPDG FE+MR+R + + + ++ +K+E++
Sbjct: 1328 EFHSIVNKPEFDKEQVIAFSPPDGCFFEIMRFRVRPPRNREKAMTVKSIMKIAGSKVEIR 1387
Query: 476 V 474
+
Sbjct: 1388 I 1388
Score = 35.1 bits (77), Expect = 0.059
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = -1
Query: 379 CLKGKAKYKASENAIVWKIKRM-----AGMKETQLSAEIELLETDTKKKWTRPPISMGFE 215
C G+AKY+ ++VW+I R+ A K L EL D + P + F
Sbjct: 1469 CAIGEAKYEHVYRSLVWRIPRLPEKHHAAYKSHLLKCRFELSSFDLMPEEFLPRCDVDFT 1528
Query: 214 VPFAP-SGFKVRYLKVFEPKLNYSDHD-VIKWVRYIGR 107
+P A S VR + V + + D D V K+VRY+ +
Sbjct: 1529 MPLATVSNTVVRSVSVEQ----HEDSDRVEKFVRYVAK 1562
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -1
Query: 199 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 92
+G VR+L V+ + N +D D + +R I RSGLYE
Sbjct: 2015 TGSDVRHLLVYVTQTNPTDADPSELLRTIKRSGLYE 2050
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -1
Query: 199 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 92
+G VR+L V+ + N +D D + +R I RSGLYE
Sbjct: 2015 TGSDVRHLLVYVTQTNPTDADPSELLRTIKRSGLYE 2050
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -1
Query: 199 SGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYE 92
+G VR+L V+ + N +D D + +R I RSGLYE
Sbjct: 2015 TGSDVRHLLVYVTQTNPTDADPSELLRTIKRSGLYE 2050
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +2
Query: 311 RHAFDLPHDSVLRGFILRFPLQANQLHPXWCSAELESSLRSSVRAGRA*SYSSAQP 478
RH P +S+L G R P Q + + S V AGR SYSS+QP
Sbjct: 343 RHDLPPPPNSLLTGMSSRMPTQDDMDDLPPPPESVGGSSAYGVFAGRTESYSSSQP 398
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 524 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKI 417
V PLVRE+ R K +LK F L+G KI+ K+
Sbjct: 55 VKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKL 90
>AF016685-9|AAG24149.1| 330|Caenorhabditis elegans Seven tm
receptor protein 87 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 457 KLLFSTTLTSILVRPTSRTSGMTRNGRDMSFVV 555
+L+FS T+ ++ S TSGM + D SFVV
Sbjct: 45 RLMFSYTIVEMVYSFLSFTSGMKAHSTDTSFVV 77
>Z93379-10|CAB07594.1| 508|Caenorhabditis elegans Hypothetical
protein F21H7.2 protein.
Length = 508
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = -3
Query: 701 DSDPARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRV 522
D +P + D +F K T ++++ +P D + + ++TK +S
Sbjct: 405 DLNPYSEDLQAICAKDKEFFSDYKRIWTNTLYNLNPLPTDAK-DRPDPKSTKPVSFKLPT 463
Query: 521 IPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNT 399
V + R + E + V F+P+ GQK++ K +P N+
Sbjct: 464 TTTVYK-RRVQSEAQKVTTVTFQPTPKGQKMKKKKSSPSNS 503
>Z92830-17|CAB07364.1| 508|Caenorhabditis elegans Hypothetical
protein F21H7.2 protein.
Length = 508
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = -3
Query: 701 DSDPARXGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRV 522
D +P + D +F K T ++++ +P D + + ++TK +S
Sbjct: 405 DLNPYSEDLQAICAKDKEFFSDYKRIWTNTLYNLNPLPTDAK-DRPDPKSTKPVSFKLPT 463
Query: 521 IPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNT 399
V + R + E + V F+P+ GQK++ K +P N+
Sbjct: 464 TTTVYK-RRVQSEAQKVTTVTFQPTPKGQKMKKKKSSPSNS 503
>Z75548-4|CAA99912.1| 117|Caenorhabditis elegans Hypothetical
protein R90.4 protein.
Length = 117
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 575 FELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIP 414
F+ + + D + FRV RE+ R +V V K N+ L +K +KIP
Sbjct: 31 FDRLMEESRTDSNGQFRVSGSKREISRIDPKVNVYHKCNYN-GLCSKKFTIKIP 83
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 567 ELKLSVRWYE-GDGMFSFELAQLHALVELTVVND 665
+L++ V +YE GDG F +L +L A+ + VND
Sbjct: 46 DLEVVVNFYEAGDGTFQLQLPKLTAVKPVDKVND 79
>Z49125-4|CAA88936.1| 644|Caenorhabditis elegans Hypothetical
protein C47G2.4 protein.
Length = 644
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 321 LIFHTIAFSEALYFAFPFKQISCTPXGVQRSW 416
L +AFSE+ + + +C P GV+R W
Sbjct: 326 LFLENLAFSESNGYNLELSRNTCVPIGVRRFW 357
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 567 ELKLSVRWYE-GDGMFSFELAQLHALVELTVVND 665
+L++ V +YE GDG F +L +L A+ + VND
Sbjct: 46 DLEVVVNFYEAGDGTFQLQLPKLTAVKPVDKVND 79
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 524 VIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVK 420
V PLVRE+ R K +LK F L+G KI+ K
Sbjct: 55 VKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPK 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,940,868
Number of Sequences: 27780
Number of extensions: 377135
Number of successful extensions: 1172
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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