Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P21
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 29 4.0
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 29 4.0
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 4.0
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 4.0
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 4.0
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 29 4.0
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 7.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.0
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 28 9.2
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 9.2
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 9.2
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 650 TNHPRLNIHFHQSPDAVLEGVHAGVKPP-LSSEAPSAYLTPSSLGMAKGVSP 498
TNHP LN H + P A++ G G PP L S +A TP G A +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 650 TNHPRLNIHFHQSPDAVLEGVHAGVKPP-LSSEAPSAYLTPSSLGMAKGVSP 498
TNHP LN H + P A++ G G PP L S +A TP G A +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -3
Query: 762 PPLXXXALXXXSRPYASSHPPLRXRVHQPDHQIPDSIHQPPQT*HPFPSIP 610
PP A +RP +S PP+R PD P Q P HP PS P
Sbjct: 321 PPATTRAPPATTRPAPASQPPVR-EPETPDSGYPSPAPQEPA--HPSPSYP 368
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = -1
Query: 671 IKSPIPYTNHPRLNIHFHQSPDAVLEGVHAGVKPPLSSEAPSAYLTP----SSLGMA--- 513
I SP Y+N PR FH+ P+A L + LSS +P++ +P SS +
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDPNA-LSQFQQSREALLSSTSPTSNYSPINKFSSSTLTQYA 169
Query: 512 -KGVSPPYFQVNDESQAS 462
K SPP F N S+A+
Sbjct: 170 NKSPSPPSFG-NSNSEAT 186
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -1
Query: 668 KSPIPYTNHPRLNIHFHQSPDAVLEGVHAGVKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 489
+ PIP +HP+ H H + +V VH+ SS AP+ T S+ + +
Sbjct: 82 QKPIP-KSHPKHQEHHHHAKASVSTPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSAR 140
Query: 488 QVNDESQA 465
DES +
Sbjct: 141 VSEDESDS 148
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -1
Query: 668 KSPIPYTNHPRLNIHFHQSPDAVLEGVHAGVKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 489
+ PIP +HP+ H H + +V VH+ SS AP+ T S+ + +
Sbjct: 853 QKPIP-KSHPKHQEHHHHAKASVSTPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSAR 911
Query: 488 QVNDESQA 465
DES +
Sbjct: 912 VSEDESDS 919
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -1
Query: 668 KSPIPYTNHPRLNIHFHQSPDAVLEGVHAGVKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 489
+ PIP +HP+ H H + +V VH+ SS AP+ T S+ + +
Sbjct: 850 QKPIP-KSHPKHQEHHHHAKASVSTPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSAR 908
Query: 488 QVNDESQA 465
DES +
Sbjct: 909 VSEDESDS 916
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 727 SPLCIKPPSPAXSGTSTRSS--NPRFHTPTTPDL 632
SP ++ P+ + S T ++S NP++H PT DL
Sbjct: 580 SPDAVETPTNSGSSTPPQTSVRNPKYHVPTPTDL 613
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 727 SPLCIKPPSPAXSGTSTRSS--NPRFHTPTTPDL 632
SP ++ P+ + S T ++S NP++H PT DL
Sbjct: 482 SPDAVETPTNSGSSTPPQTSVRNPKYHVPTPTDL 515
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 723 PYASSHPPLRXRVHQPDHQIPDS 655
P +S HPPL H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 706 PSPAXSGTSTRSSNPRFHTPTTPDLTSISINPLTPY 599
P+P + T+T +NP TPTT TS N ++P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPH 524
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 730 VSPLCIKPP-SPAXSGTSTRSSNPRFHTPTTPDLTSISI 617
VS C++PP +P + ++T ++ P+ T +T TS +I
Sbjct: 1145 VSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAI 1183
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 712 KPPSPAXSGTSTRSSNPRFHTPTTPDLTSISINPLT 605
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 668 KSPIPYTNHPRLNIHFHQSPDAVLEGVHAGVKPPLSSEAPSAYLTPSSLGMAKGVSP 498
+SP+ + P + + + P V GV G PP + Y P +G+ GV+P
Sbjct: 22 RSPVGFGVTPIMPLPYGAPPPPVGAGV--GYAPPPPRPYGATYAPPPPMGIGAGVNP 76
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 569 PLSSEAPSAYLTPSSLGMAKGVSPP 495
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 569 PLSSEAPSAYLTPSSLGMAKGVSPP 495
P+++EAP+A PS + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,231,613
Number of Sequences: 27780
Number of extensions: 366447
Number of successful extensions: 1207
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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