Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_P17
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              24   1.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.4  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    23   4.3  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   4.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.5  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 345 SCQDWE*SGGCKDSSNLLPC 404
           +C+D   S  CK SS LL C
Sbjct: 102 NCKDITESNSCKKSSKLLQC 121


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 234 YNMGRAWGDLCTPCPPRG 181
           Y  G  +   CTP PPRG
Sbjct: 384 YASGAQFATPCTPSPPRG 401


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +2

Query: 221 RPMLYPQQQSRLDSATGSRSAHSPVSLR 304
           +P L PQ     DS++ SRSA SP+S++
Sbjct: 440 QPPLSPQS----DSSSSSRSAESPMSVQ 463


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 438 PRTRRCLRSCWRGDAG 485
           PRTRR  RS  RG+ G
Sbjct: 1   PRTRRVKRSDGRGNGG 16


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 209 SPQARPMLYPQQQSRLDSATGSRSAHSPVSLRYA*QLPTRPSI 337
           S  +R  L+P++   ++  +  R   SP +     QLPT  S+
Sbjct: 421 SLDSRDELHPRELEAVNLGSACRIHGSPATTAAPPQLPTEESV 463


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 586 ALLSGEVPQVSYWTVEVG 639
           ALLS +  Q+SY+T ++G
Sbjct: 200 ALLSHDEQQLSYFTQDIG 217


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 346 EILY*RASGQLLRVPERD 293
           E  Y R  GQ+L +PE D
Sbjct: 290 EYSYLRLKGQMLYIPESD 307


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 346 EILY*RASGQLLRVPERD 293
           E  Y R  GQ+L +PE D
Sbjct: 290 EYSYLRLKGQMLYIPESD 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,741
Number of Sequences: 438
Number of extensions: 3834
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)