Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P16
(805 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 38 0.002
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 28 1.4
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 27 3.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 27 4.1
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 7.2
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 7.2
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 25 9.5
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 9.5
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 410 PRDPYLSP-YWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNVVGIEVLEGLP 234
P+ P ++P Y+ K PP DP D+ + + K LK GN + V EG+P
Sbjct: 246 PKSPLVNPLYYPTGH--KDLPPSFFQCCGWDPLRDEGIAYEKALKAAGNETRLIVYEGVP 303
Query: 233 HGFLNFSLMVKEAXRGFE 180
H F + M+ + FE
Sbjct: 304 HCFWVYYPMLSLRKKYFE 321
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 271 PSVFNFLANITQSSRHGSKCTVNILTGG-NILSSSSSAQYGD---R*GSRGTENMNSS 432
P+ F+ +QS H S + N+LT N + Y D R GS T N NS+
Sbjct: 483 PATHTFIQGRSQSGTHSSSVSANVLTDSENTPIHADGDNYVDEESRIGSSSTRNDNST 540
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 374 DELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTLGNV 264
D + K FP V +H+ C++D VM + LG+V
Sbjct: 294 DRIRKSFPDVSFKNLHVLSCMEDSVM--SPFRELGSV 328
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 244 SNTSMPTTFPSVFNFLANITQSSRHGSKCTVNILTGGNILSSSSSA 381
S++S+P+TF SV + L++ T S S + T S+S+S+
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSS 610
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 316 HGSKCTVNILTGGNILSSSSSAQYGDR*GSRGTENMNS 429
H S+C +L GN+L ++ S D+ SR T + S
Sbjct: 23 HESECGSLLLNPGNVLMAAPSVSEDDQEVSRSTPELRS 60
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.8 bits (54), Expect = 7.2
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 190 RFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFLANITQSSRHGSKCTVNILTGGNILSS 369
R AS M R P R NT P+ S A T + RH + ++I N S
Sbjct: 510 RSASRAMTSP-RTPLPRVKNTQNPSRSISAEPPSATSTANRRHPTANRIDINARLNSASR 568
Query: 370 SSSAQYGDR*GSRGTE-NMNSS 432
S SA R G+ G++ NM+SS
Sbjct: 569 SRSANM-IRQGANGSDSNMSSS 589
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 244 SNTSMPTTFPSVFNFLANITQSSRHGSKCTVNI 342
+N+S+PTT+PS NIT +S S+ VNI
Sbjct: 377 TNSSIPTTYPSNSTTYQNIT-TSYPWSQPVVNI 408
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 253 SMPTTFPSVFNFLANITQSSRHGSKCTVNILTGGNILSSSSSAQYGDR*GSRGTENMNSS 432
S P T S+F+ T +S S + + NI SSSS Y G+ + +++SS
Sbjct: 483 STPVTSSSIFSTATEATDTSVQTSSAIYDSSSTSNIQSSSS--VYASSTGALSSNSLSSS 540
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 563 PPASWARCRPGWPTSTGSSAIVRPT---QEDLAVRTNLDALIARSPSEEFIFSVPRDPYL 393
P ASW GW + GS + T + + A NLD PS++ + P++ +
Sbjct: 261 PEASWGNLDDGWGETNGSWSSTDDTKHYKNEWAESINLDNF--NRPSQQEDYDKPKNTQV 318
Query: 392 S 390
S
Sbjct: 319 S 319
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 523 HP--RGPAPSSGPHRKTWRYARIWML**LAVRP 431
HP + P SS RK WR R+W RP
Sbjct: 73 HPPSKNPTSSSLSTRKRWRQKRLWSFKNFPFRP 105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,329,885
Number of Sequences: 5004
Number of extensions: 70336
Number of successful extensions: 215
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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