Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_P16
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006619-3|AAK68253.1|  943|Caenorhabditis elegans Hypothetical ...    81   9e-16
U67956-4|AAB07693.1|  396|Caenorhabditis elegans Hypothetical pr...    32   0.42 
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ...    29   2.9  

>AC006619-3|AAK68253.1|  943|Caenorhabditis elegans Hypothetical
            protein C46C11.1 protein.
          Length = 943

 Score = 81.0 bits (191), Expect = 9e-16
 Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
 Frame = -3

Query: 416  SVPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLKTL-GNVVGIEVLEG 240
            +VPRDP +SP +AD+E +   PP   +  H+DP LDD + FA KL+   G V+ +++L  
Sbjct: 847  TVPRDPLISPMYADNETMCQLPPCYFMACHMDPLLDDTISFAGKLRDAGGKVMSVDLLSS 906

Query: 239  LPHGFLNFSLMVKEAXR-GFETLRRENEAV 153
            +PHGFLNF+L+  E  + G   + R  EA+
Sbjct: 907  VPHGFLNFTLISPECKKSGQVCINRLKEAL 936


>U67956-4|AAB07693.1|  396|Caenorhabditis elegans Hypothetical
           protein F16F9.4 protein.
          Length = 396

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = -3

Query: 458 DALIARSPSEEFIFSVPRDPYLSPYWADDELLKMFPPVRILTVHLDPCLDDCVMFAKKLK 279
           + L+ +  +++FI  +  +P +SP + D E L   PP  +LT   D   D+ + +A KLK
Sbjct: 299 EKLVDQHLAKQFI-KLGTNPDVSPVFGDTEGL---PPALVLTAGYDVLKDEGIQYANKLK 354

Query: 278 TLG 270
             G
Sbjct: 355 KSG 357


>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
            protein H24G06.1a protein.
          Length = 1680

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 3/118 (2%)
 Frame = +1

Query: 112  IGYRRPRAPRPNRITASFSRRKVSNPRFASLTMREKLRNP*GRPSNTSMPTTFPSVFNFL 291
            IGYRRP     +   A  +RR+V+   F      + L       S +  P  F    + +
Sbjct: 1177 IGYRRPSTVTVDTRDADVARRRVAGTSFKKSDRADDLNFASSLRSRSQSPNKF--ALSQM 1234

Query: 292  ANITQSSRHGSKCTVNILTGGNILS--SSSSAQYGDR*GSRGTENM-NSSDGLRAIRA 456
             N   +    S  T + + G N+      S   Y  R  +RG + M  S+D L  + A
Sbjct: 1235 INSRDTPSSPSSTTGSSIVGRNLQQRRRGSDVSY-VRSATRGRDEMRKSTDALNKLMA 1291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,014,770
Number of Sequences: 27780
Number of extensions: 426246
Number of successful extensions: 1176
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)