Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P09
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 204 4e-53
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 204 4e-53
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 204 4e-53
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 85 7e-17
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 85 7e-17
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 84 1e-16
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 43 3e-04
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF016685-9|AAG24149.1| 330|Caenorhabditis elegans Seven tm rece... 30 1.7
Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 9.1
AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical ... 28 9.1
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 204 bits (499), Expect = 4e-53
Identities = 104/175 (59%), Positives = 121/175 (69%), Gaps = 2/175 (1%)
Frame = -3
Query: 699 DPARFGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPGPESLSS*GIAPQKTYLCRFASS 520
DP + + V IDDCQFHQCVKL+KFETEH+ISFIPP E K F
Sbjct: 236 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGE-YELMRYRTTKDIQLPFRVI 294
Query: 519 RSCGRWAAPRWKSRLC*RVTSSPPLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENA 340
+ + + ++ + P LL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENA
Sbjct: 295 PLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENA 354
Query: 339 IVWKIKRMAGMKETQLSAEIELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRY 181
IVWKIKRMAGMKE+Q+SAEI+LL T KKKW RPP+SM FEVPFAPSG KVRY
Sbjct: 355 IVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRY 409
Score = 77.8 bits (183), Expect = 9e-15
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = -1
Query: 212 PLHPPDSRSAXLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 84
P P + LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 399 PFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 441
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 204 bits (499), Expect = 4e-53
Identities = 104/175 (59%), Positives = 121/175 (69%), Gaps = 2/175 (1%)
Frame = -3
Query: 699 DPARFGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPGPESLSS*GIAPQKTYLCRFASS 520
DP + + V IDDCQFHQCVKL+KFETEH+ISFIPP E K F
Sbjct: 230 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGE-YELMRYRTTKDIQLPFRVI 288
Query: 519 RSCGRWAAPRWKSRLC*RVTSSPPLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENA 340
+ + + ++ + P LL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENA
Sbjct: 289 PLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENA 348
Query: 339 IVWKIKRMAGMKETQLSAEIELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRY 181
IVWKIKRMAGMKE+Q+SAEI+LL T KKKW RPP+SM FEVPFAPSG KVRY
Sbjct: 349 IVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRY 403
Score = 77.8 bits (183), Expect = 9e-15
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = -1
Query: 212 PLHPPDSRSAXLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 84
P P + LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 393 PFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 435
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 204 bits (499), Expect = 4e-53
Identities = 104/175 (59%), Positives = 121/175 (69%), Gaps = 2/175 (1%)
Frame = -3
Query: 699 DPARFGKPVVVIDDCQFHQCVKLSKFETEHSISFIPPGPESLSS*GIAPQKTYLCRFASS 520
DP + + V IDDCQFHQCVKL+KFETEH+ISFIPP E K F
Sbjct: 236 DPNKASRAAVAIDDCQFHQCVKLTKFETEHAISFIPPDGE-YELMRYRTTKDIQLPFRVI 294
Query: 519 RSCGRWAAPRWKSRLC*RVTSSPPLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENA 340
+ + + ++ + P LL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENA
Sbjct: 295 PLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENA 354
Query: 339 IVWKIKRMAGMKETQLSAEIELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRY 181
IVWKIKRMAGMKE+Q+SAEI+LL T KKKW RPP+SM FEVPFAPSG KVRY
Sbjct: 355 IVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRY 409
Score = 77.8 bits (183), Expect = 9e-15
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = -1
Query: 212 PLHPPDSRSAXLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 84
P P + LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 399 PFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 441
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 84.6 bits (200), Expect = 7e-17
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Frame = -3
Query: 672 VVIDDCQFHQCVKLSKFETEHSISFIPP-GPESLSS*GIAPQKTYLCRFASSRSCGRWAA 496
V ++D +FHQCV+LS+F+T+ +ISFIPP G L S + L +S R +
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSYRLTTVVKPLIWIETSIE--RHSH 287
Query: 495 PRWKSRLC*RVTSSPPLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRM 316
R + + +E+ IP P + + G KY ++A VW IK
Sbjct: 288 SRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNF 347
Query: 315 AGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRY 181
G KE L+A + L +++ RPPI + FE+P F SG +VRY
Sbjct: 348 PGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRY 393
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 84.6 bits (200), Expect = 7e-17
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Frame = -3
Query: 672 VVIDDCQFHQCVKLSKFETEHSISFIPP-GPESLSS*GIAPQKTYLCRFASSRSCGRWAA 496
V ++D +FHQCV+LS+F+T+ +ISFIPP G L S + L +S R +
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPDGAFELMSYRLTTVVKPLIWIETSIE--RHSH 287
Query: 495 PRWKSRLC*RVTSSPPLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRM 316
R + + +E+ IP P + + G KY ++A VW IK
Sbjct: 288 SRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNF 347
Query: 315 AGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRY 181
G KE L+A + L +++ RPPI + FE+P F SG +VRY
Sbjct: 348 PGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRY 393
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 84.2 bits (199), Expect = 1e-16
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = -3
Query: 672 VVIDDCQFHQCVKLSKFETEHSISFIPPGPE-SLSS*GIAPQKTYLCRFASSRSCGRWAA 496
V ++D +FHQCV+LS+F++E +ISFIPP E L S + Q L ++ R A
Sbjct: 234 VELEDIKFHQCVRLSRFDSERTISFIPPDGEFELMSYRLTTQVKPLIWVEAAVE--RHAH 291
Query: 495 PRWKSRLC*RVTSSPPLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRM 316
R + + + + +EV IP P + S + G AKY NAIVW I+
Sbjct: 292 SRVEYMVKAKSQFKRQSVANHVEVIIPVPSDVSAPKFKTGAGTAKYVPELNAIVWSIRSF 351
Query: 315 AGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRY 181
G +E + + L +++ RPPI++ FE+P + SG +VRY
Sbjct: 352 PGGREYIMRSSFMLPSIGSEELEGRPPINVKFEIPYYTTSGLQVRY 397
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 42.7 bits (96), Expect = 3e-04
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Frame = -3
Query: 669 VIDDCQFHQCVKLSKFETEHSISFIPP-GPESLSS*GIAPQKTYLCRFASSRSCGRWAAP 493
++DD FH CV+ ++E E +SF+PP G L S IA Q + P
Sbjct: 227 LLDDVSFHPCVRYKRWENEKVLSFVPPDGNFRLLSYHIAAQNMVAIPIYVRQVIS--LKP 284
Query: 492 RWKSRLC*RVTSSPPL-LGQKIE---VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKI 325
+L +T P L +G+ +E ++I P L+ G+ + + + W I
Sbjct: 285 N-AGKL--DLTVGPKLSMGKVLEDVVLEITMPKCVQNCNLVASHGRIAFDPTTKLLQWTI 341
Query: 324 KRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEV-PFAPSGFKV 187
++ K + L + + T + PPIS+ F++ SG KV
Sbjct: 342 GKIEVGKPSTLKGSVAVSGTTVAE---NPPISLKFKINQLVLSGLKV 385
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -3
Query: 381 CLKGKAKYKASENAIVWKIKRM-----AGMKETQLSAEIELLETDTKKKWTRPPISMGFE 217
C G+AKY+ ++VW+I R+ A K L EL D + P + F
Sbjct: 1469 CAIGEAKYEHVYRSLVWRIPRLPEKHHAAYKSHLLKCRFELSSFDLMPEEFLPRCDVDFT 1528
Query: 216 VPFA 205
+P A
Sbjct: 1529 MPLA 1532
>AF016685-9|AAG24149.1| 330|Caenorhabditis elegans Seven tm
receptor protein 87 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 429 RSSVRAGEGLKLLFSTTLTSILVRPTSRTSGMTRNGRDMSFVV 557
++S G+ +L+FS T+ ++ S TSGM + D SFVV
Sbjct: 35 KASPSYGDYRRLMFSYTIVEMVYSFLSFTSGMKAHSTDTSFVV 77
>Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical
protein K11D2.3b protein.
Length = 58
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 243 RPPISMGFEVP-FAPSGFKVRY 181
RPPI + FE+P F SG +VRY
Sbjct: 8 RPPIKVKFEIPYFTTSGIQVRY 29
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 212 PLHPPDSRSAXLKVFEPKLNYSDHDVIK 129
P++ PD RS V NY D D IK
Sbjct: 4016 PMNTPDGRSTSASVVSTPSNYDDSDSIK 4043
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 212 PLHPPDSRSAXLKVFEPKLNYSDHDVIK 129
P++ PD RS V NY D D IK
Sbjct: 4016 PMNTPDGRSTSASVVSTPSNYDDSDSIK 4043
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 212 PLHPPDSRSAXLKVFEPKLNYSDHDVIK 129
P++ PD RS V NY D D IK
Sbjct: 4016 PMNTPDGRSTSASVVSTPSNYDDSDSIK 4043
>AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical
protein ZK355.6 protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 408 LNTSGVQLICL--KGKAKYKASENAIVWKIKRM 316
LN S ++ CL GK +A + VWK+K+M
Sbjct: 335 LNMSSLEPFCLFIYGKVVLEAGDEEFVWKLKKM 367
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,287,243
Number of Sequences: 27780
Number of extensions: 366848
Number of successful extensions: 1134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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