Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P08
(926 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 33 1.5
BC033821-1|AAH33821.1| 616|Homo sapiens chromosome 16 open read... 31 5.9
BC032400-1|AAH32400.1| 553|Homo sapiens C16orf44 protein protein. 31 5.9
BC021997-1|AAH21997.1| 619|Homo sapiens zinc finger protein 668... 31 5.9
AK027398-1|BAB55084.1| 619|Homo sapiens protein ( Homo sapiens ... 31 5.9
AK023541-1|BAB14602.1| 498|Homo sapiens protein ( Homo sapiens ... 31 5.9
AB209710-1|BAD92947.1| 624|Homo sapiens Hypothetical protein FL... 31 5.9
BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene fami... 31 7.9
AK074056-1|BAB84882.1| 296|Homo sapiens FLJ00127 protein protein. 31 7.9
AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein. 31 7.9
AC108030-1|AAY40935.1| 570|Homo sapiens unknown protein. 31 7.9
AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein. 31 7.9
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 33.1 bits (72), Expect = 1.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 812 PPSPAISXTSTRSSNPXIPYTNHPRLNIHFHQSPDAVLEGVR 687
P +P+ +S + S P P + PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437
>BC033821-1|AAH33821.1| 616|Homo sapiens chromosome 16 open reading
frame 44 protein.
Length = 616
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 688 RTPSSTASGD*WKWMLSLGWLVYGIXGFDDRVDVXE 795
R P +TA G W M SLG +Y I G DD ++ E
Sbjct: 476 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIESME 509
>BC032400-1|AAH32400.1| 553|Homo sapiens C16orf44 protein protein.
Length = 553
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 688 RTPSSTASGD*WKWMLSLGWLVYGIXGFDDRVDVXE 795
R P +TA G W M SLG +Y I G DD ++ E
Sbjct: 413 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIESME 446
>BC021997-1|AAH21997.1| 619|Homo sapiens zinc finger protein 668
protein.
Length = 619
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 697 KEFAPG*SLRCHQRLHQRISPPRHWAWXKGFRPL 596
K F+ SL CHQR+H P R A KGF L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264
>AK027398-1|BAB55084.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ14492 fis, clone MAMMA1002937, weakly similar to
ZINC FINGER PROTEIN 135. ).
Length = 619
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 697 KEFAPG*SLRCHQRLHQRISPPRHWAWXKGFRPL 596
K F+ SL CHQR+H P R A KGF L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264
>AK023541-1|BAB14602.1| 498|Homo sapiens protein ( Homo sapiens
cDNA FLJ13479 fis, clone PLACE1003738, weakly similar to
ZINC FINGER PROTEIN 135. ).
Length = 498
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 697 KEFAPG*SLRCHQRLHQRISPPRHWAWXKGFRPL 596
K F+ SL CHQR+H P R A KGF L
Sbjct: 110 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 143
>AB209710-1|BAD92947.1| 624|Homo sapiens Hypothetical protein
FLJ14492 variant protein.
Length = 624
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 697 KEFAPG*SLRCHQRLHQRISPPRHWAWXKGFRPL 596
K F+ SL CHQR+H P R A KGF L
Sbjct: 236 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 269
>BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene family,
member D (S. cerevisiae) protein.
Length = 1033
Score = 30.7 bits (66), Expect = 7.9
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -2
Query: 916 PLXXTADVTVEGVNVXATPXIXXH*YWRXRPYASSHPPLRFRXHQPDHQIPXFHTPTTPD 737
PL TA G+ P H + + +A+ HPP RF P + + H P P
Sbjct: 47 PLGATA---TRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPS 103
Query: 736 LTSISINPLT 707
S P++
Sbjct: 104 AQSSYPGPIS 113
>AK074056-1|BAB84882.1| 296|Homo sapiens FLJ00127 protein protein.
Length = 296
Score = 30.7 bits (66), Expect = 7.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 688 RTPSSTASGD*WKWMLSLGWLVYGIXGFDDRVDVXE 795
R P +TA G W M SLG +Y I G DD ++ E
Sbjct: 156 RRPMTTARG--WHSMSSLGDSIYSIGGSDDNIESME 189
>AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein.
Length = 1032
Score = 30.7 bits (66), Expect = 7.9
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -2
Query: 916 PLXXTADVTVEGVNVXATPXIXXH*YWRXRPYASSHPPLRFRXHQPDHQIPXFHTPTTPD 737
PL TA G+ P H + + +A+ HPP RF P + + H P P
Sbjct: 47 PLGATA---TRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPS 103
Query: 736 LTSISINPLT 707
S P++
Sbjct: 104 AQSSYPGPIS 113
>AC108030-1|AAY40935.1| 570|Homo sapiens unknown protein.
Length = 570
Score = 30.7 bits (66), Expect = 7.9
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -2
Query: 916 PLXXTADVTVEGVNVXATPXIXXH*YWRXRPYASSHPPLRFRXHQPDHQIPXFHTPTTPD 737
PL TA G+ P H + + +A+ HPP RF P + + H P P
Sbjct: 47 PLGATA---TRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPS 103
Query: 736 LTSISINPLT 707
S P++
Sbjct: 104 AQSSYPGPIS 113
>AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein.
Length = 1093
Score = 30.7 bits (66), Expect = 7.9
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -2
Query: 916 PLXXTADVTVEGVNVXATPXIXXH*YWRXRPYASSHPPLRFRXHQPDHQIPXFHTPTTPD 737
PL TA G+ P H + + +A+ HPP RF P + + H P P
Sbjct: 108 PLGATA---TRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPS 164
Query: 736 LTSISINPLT 707
S P++
Sbjct: 165 AQSSYPGPIS 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,957,401
Number of Sequences: 237096
Number of extensions: 2204877
Number of successful extensions: 8791
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8788
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -