Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P06
(923 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640827-1|CAE45903.1| 1083|Homo sapiens hypothetical protein pr... 36 0.16
AF506799-1|AAO15881.1| 1113|Homo sapiens KIBRA protein protein. 36 0.16
BC067754-1|AAH67754.1| 397|Homo sapiens vacuolar protein sortin... 33 1.5
AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinom... 33 1.5
AL834189-1|CAD38883.1| 185|Homo sapiens hypothetical protein pr... 33 1.5
AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens ... 33 1.5
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 31 4.5
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 31 4.5
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 31 4.5
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 31 4.5
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 31 4.5
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein. 31 5.9
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni... 31 5.9
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte... 31 5.9
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto... 31 5.9
>BX640827-1|CAE45903.1| 1083|Homo sapiens hypothetical protein
protein.
Length = 1083
Score = 36.3 bits (80), Expect = 0.16
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -3
Query: 921 IGPYYIXHVNQVTQVRRPEG*NG*VFRRRC*GTTFHTAQEALEAKKEMYDIKKQRLCLAS 742
+G Y+I H + TQ+ P + AQEAL A+KE+Y +K+QRL LA
Sbjct: 32 VGDYFIDHNTKTTQIEDPRV-QWRREQEHMLKDYLVVAQEALSAQKEIYQVKQQRLELAQ 90
Query: 741 R 739
+
Sbjct: 91 Q 91
>AF506799-1|AAO15881.1| 1113|Homo sapiens KIBRA protein protein.
Length = 1113
Score = 36.3 bits (80), Expect = 0.16
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -3
Query: 921 IGPYYIXHVNQVTQVRRPEG*NG*VFRRRC*GTTFHTAQEALEAKKEMYDIKKQRLCLAS 742
+G Y+I H + TQ+ P + AQEAL A+KE+Y +K+QRL LA
Sbjct: 67 VGDYFIDHNTKTTQIEDPRV-QWRREQEHMLKDYLVVAQEALSAQKEIYQVKQQRLELAQ 125
Query: 741 R 739
+
Sbjct: 126 Q 126
>BC067754-1|AAH67754.1| 397|Homo sapiens vacuolar protein sorting
37 homolog A (S. cerevisiae) protein.
Length = 397
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -2
Query: 901 SRQSGDPG*KTRGLEWLSVQEAMLRDYLPHSAGGSRG*ERDVRYKETKALPSFKMNINTS 722
S +G PG GL L Q+ L + L +S ++DV Y+ + + +NIN
Sbjct: 13 SSAAGSPG----GLTSLQQQKQRLIESLRNSHSSIAEIQKDVEYRLPFTINNLTININ-- 66
Query: 721 TMLCPPSLPQEL-VVSVF 671
+L PP PQE V+SV+
Sbjct: 67 -ILLPPQFPQEKPVISVY 83
>AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinoma
related protein 1 protein.
Length = 397
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -2
Query: 901 SRQSGDPG*KTRGLEWLSVQEAMLRDYLPHSAGGSRG*ERDVRYKETKALPSFKMNINTS 722
S +G PG GL L Q+ L + L +S ++DV Y+ + + +NIN
Sbjct: 13 SSAAGSPG----GLTSLQQQKQRLIESLRNSHSSIAEIQKDVEYRLPFTINNLTININ-- 66
Query: 721 TMLCPPSLPQEL-VVSVF 671
+L PP PQE V+SV+
Sbjct: 67 -ILLPPQFPQEKPVISVY 83
>AL834189-1|CAD38883.1| 185|Homo sapiens hypothetical protein
protein.
Length = 185
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -2
Query: 901 SRQSGDPG*KTRGLEWLSVQEAMLRDYLPHSAGGSRG*ERDVRYKETKALPSFKMNINTS 722
S +G PG GL L Q+ L + L +S ++DV Y+ + + +NIN
Sbjct: 13 SSAAGSPG----GLTSLQQQKQRLIESLRNSHSSIAEIQKDVEYRLPFTINNLTININ-- 66
Query: 721 TMLCPPSLPQEL-VVSVF 671
+L PP PQE V+SV+
Sbjct: 67 -ILLPPQFPQEKPVISVY 83
>AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ32642 fis, clone SYNOV2001144. ).
Length = 397
Score = 33.1 bits (72), Expect = 1.5
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -2
Query: 901 SRQSGDPG*KTRGLEWLSVQEAMLRDYLPHSAGGSRG*ERDVRYKETKALPSFKMNINTS 722
S +G PG GL L Q+ L + L +S ++DV Y+ + + +NIN
Sbjct: 13 SSAAGSPG----GLTSLQQQKQRLIESLRNSHSSIAEIQKDVEYRLPFTINNLTININ-- 66
Query: 721 TMLCPPSLPQEL-VVSVF 671
+L PP PQE V+SV+
Sbjct: 67 -ILLPPQFPQEKPVISVY 83
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 31.5 bits (68), Expect = 4.5
Identities = 31/88 (35%), Positives = 42/88 (47%)
Frame = -3
Query: 534 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 355
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 354 TKGSTSELTHRHSPLSFSPDLLSGSRFR 271
GS+S T R S S S S SR R
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRR 130
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.5 bits (68), Expect = 4.5
Identities = 31/88 (35%), Positives = 42/88 (47%)
Frame = -3
Query: 534 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 355
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 354 TKGSTSELTHRHSPLSFSPDLLSGSRFR 271
GS+S T R S S S S SR R
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRR 130
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.5 bits (68), Expect = 4.5
Identities = 31/88 (35%), Positives = 42/88 (47%)
Frame = -3
Query: 534 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 355
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 354 TKGSTSELTHRHSPLSFSPDLLSGSRFR 271
GS+S T R S S S S SR R
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRR 130
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 31.5 bits (68), Expect = 4.5
Identities = 31/88 (35%), Positives = 42/88 (47%)
Frame = -3
Query: 534 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 355
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 47 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 104
Query: 354 TKGSTSELTHRHSPLSFSPDLLSGSRFR 271
GS+S T R S S S S SR R
Sbjct: 105 RSGSSS--TSRSSSSSSSSGSPSPSRRR 130
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 31.5 bits (68), Expect = 4.5
Identities = 31/88 (35%), Positives = 42/88 (47%)
Frame = -3
Query: 534 GTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLA 355
G T E S + R + TR R S+S ++R SS S +G+ S SSS+ + +
Sbjct: 24 GATKESSEKDRGRDKTRKRRSASSGSSSTRSR--SSSTSSSGSSTSTGSSSGSSSSSASS 81
Query: 354 TKGSTSELTHRHSPLSFSPDLLSGSRFR 271
GS+S T R S S S S SR R
Sbjct: 82 RSGSSS--TSRSSSSSSSSGSPSPSRRR 107
>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
Length = 1566
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 468 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 334
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103
>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
protein.
Length = 1581
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 468 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 334
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118
>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP205
protein.
Length = 1566
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 468 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 334
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1060 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1103
>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP220
protein.
Length = 1581
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 468 GKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSE 334
GKPS+ + GS S +G+ HH H S SSS+ S + K +S+
Sbjct: 1075 GKPSSHSQYTSSGSV-SSSGSKSHHSHSSSSSSSASTSGKMKSSK 1118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,782,686
Number of Sequences: 237096
Number of extensions: 2457650
Number of successful extensions: 9384
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9365
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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