BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P06
(923 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 51 2e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 50 5e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 50 5e-06
BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p pro... 44 2e-04
AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-P... 44 2e-04
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 42 0.001
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 42 0.001
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 38 0.026
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 38 0.026
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 38 0.026
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 37 0.034
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 34 0.24
BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p pro... 32 1.3
AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA... 32 1.3
BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p pro... 31 2.2
AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcriptio... 31 2.2
AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p pro... 31 2.2
AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related ... 31 2.2
AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-P... 31 2.2
AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-P... 31 2.2
AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-P... 31 2.2
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 31 2.2
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 30 3.9
U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein. 30 5.2
AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p pro... 30 5.2
AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA ... 30 5.2
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 6.8
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 6.8
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 6.8
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 6.8
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 6.8
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 6.8
U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein. 29 9.0
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 9.0
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 9.0
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 29 9.0
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 9.0
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 51.2 bits (117), Expect = 2e-06
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = -1
Query: 668 VQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLIVAAGNYI 489
+Q++ R+ G WF+RN LH DL+L + + S R+ ++ RH N L A
Sbjct: 824 IQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNRSR 883
Query: 488 PDPVDRMVNRRRRPKHVITDPP 423
P R +N RR+P+ +IT P
Sbjct: 884 P---PRRLN-RRQPRDLITRSP 901
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 50.0 bits (114), Expect = 5e-06
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -1
Query: 698 ASRTSRKCIL-VQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHE 522
ASR++ I QSR RI GAPW+LRN ++H DL++ + + ++ EK H
Sbjct: 804 ASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHT 863
Query: 521 NPL 513
NPL
Sbjct: 864 NPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 50.0 bits (114), Expect = 5e-06
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -1
Query: 698 ASRTSRKCIL-VQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHE 522
ASR++ I QSR RI GAPW+LRN ++H DL++ + + ++ EK H
Sbjct: 804 ASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHT 863
Query: 521 NPL 513
NPL
Sbjct: 864 NPL 866
>BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p
protein.
Length = 1288
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = -3
Query: 921 IGPYYIXHVNQVTQVRRPEG*NG*VFRRRC*GTTFHTAQEALEAKKEMYDIKKQRLCLA 745
IGPYYI H+ Q TQ+ P + + AQ+ LE K+EM+D+K+QRL A
Sbjct: 115 IGPYYINHLAQSTQLEDPRQ-EWKTVQEQMLSDYLSAAQDQLENKREMFDVKQQRLLWA 172
>AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-PA
protein.
Length = 1288
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = -3
Query: 921 IGPYYIXHVNQVTQVRRPEG*NG*VFRRRC*GTTFHTAQEALEAKKEMYDIKKQRLCLA 745
IGPYYI H+ Q TQ+ P + + AQ+ LE K+EM+D+K+QRL A
Sbjct: 115 IGPYYINHLAQSTQLEDPRQ-EWKTVQEQMLSDYLSAAQDQLENKREMFDVKQQRLLWA 172
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 41.9 bits (94), Expect = 0.001
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = -1
Query: 701 AASRTSRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHE 522
AA K ++Q++ R GAPW++R D+ DL++ LQ+ + ++ E+ H
Sbjct: 818 AAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHP 877
Query: 521 NPLIVAAGNYIPDPVD-RMVNRRRRPKHVITDPPD 420
N L G D R +RR +H D P+
Sbjct: 878 NSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 41.9 bits (94), Expect = 0.001
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = -1
Query: 701 AASRTSRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHE 522
AA K ++Q++ R GAPW++R D+ DL++ LQ+ + ++ E+ H
Sbjct: 620 AAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERLNVHP 679
Query: 521 NPLIVAAGNYIPDPVD-RMVNRRRRPKHVITDPPD 420
N L G D R +RR +H D P+
Sbjct: 680 NSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.5 bits (83), Expect = 0.026
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -1
Query: 686 SRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI- 510
++K +++++ R + A + R D+ + SF + AS R+ HENPLI
Sbjct: 882 AKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIY 941
Query: 509 -VAAGNYIPDPVDRMVNR 459
+ Y P+ ++ NR
Sbjct: 942 DLLINAYKPNRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.5 bits (83), Expect = 0.026
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -1
Query: 686 SRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI- 510
++K +++++ R + A + R D+ + SF + AS R+ HENPLI
Sbjct: 882 AKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIY 941
Query: 509 -VAAGNYIPDPVDRMVNR 459
+ Y P+ ++ NR
Sbjct: 942 DLLINAYKPNRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.5 bits (83), Expect = 0.026
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -1
Query: 686 SRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI- 510
++K +++++ R + A + R D+ + SF + AS R+ HENPLI
Sbjct: 882 AKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIY 941
Query: 509 -VAAGNYIPDPVDRMVNR 459
+ Y P+ ++ NR
Sbjct: 942 DLLINAYKPNRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 37.1 bits (82), Expect = 0.034
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -1
Query: 686 SRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHENPLI- 510
++K +++++ R + A + R D+ + SF + AS R+ HENPLI
Sbjct: 435 AKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLIY 494
Query: 509 -VAAGNYIPDPVDRMVNR 459
+ Y P+ ++ NR
Sbjct: 495 DLLINAYKPNRLELSKNR 512
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 34.3 bits (75), Expect = 0.24
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 701 AASRTSRKCILVQSRFCRIAVGAPWFLRNVDLHDDLELDSFSKYLQSASLRHFEKAARHE 522
AA + ++Q+R R P+++R LH DL L + + + + R+ ++ RH
Sbjct: 819 AAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHH 878
Query: 521 NPL 513
+ L
Sbjct: 879 SIL 881
>BT029263-1|ABK30900.1| 495|Drosophila melanogaster IP03351p
protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 519 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 376
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 77 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 128
>AE014296-2454|AAF49683.1| 602|Drosophila melanogaster CG3020-PA
protein.
Length = 602
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 519 PSHRSRWKLHTRPSRPNGKPSTSPKARHYG----SS*SINGAFRHHKHRSPS 376
PS S+ + + PSR +G +SP+ R +G SS F HH RSPS
Sbjct: 184 PSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPS 235
>BT022200-1|AAY51594.1| 751|Drosophila melanogaster IP01101p
protein.
Length = 751
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 402 RHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLLSGS 280
+H +H + SSS+P LAT G S T + ++ L+SGS
Sbjct: 382 QHLQHNNSSSSSPKLATPGDNSGNTSSYQQ-QYASQLVSGS 421
>AY574373-1|AAS87366.1| 595|Drosophila melanogaster transcription
factor kay-beta protein.
Length = 595
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AY069805-1|AAL39950.1| 546|Drosophila melanogaster SD04477p
protein.
Length = 546
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AF238310-1|AAF69496.1| 595|Drosophila melanogaster Fos-related
antigen protein.
Length = 595
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4439|AAZ83994.1| 617|Drosophila melanogaster CG33956-PE,
isoform E protein.
Length = 617
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 377 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 416
>AE014297-4438|AAZ83993.1| 546|Drosophila melanogaster CG33956-PB,
isoform B protein.
Length = 546
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 306 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 345
>AE014297-4436|AAZ83992.1| 595|Drosophila melanogaster CG33956-PA,
isoform A protein.
Length = 595
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 355 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 394
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 NGAFRHHKHRSPSSSNPSLATKGSTSELTHR-HSPLSFSP 298
+GA HH H S SSN ++ +T T R +SPL P
Sbjct: 482 SGASSHHNHNSNDSSNGTITGMDATLNSTGRSNSPLDLKP 521
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 30.3 bits (65), Expect = 3.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 665 QSRFCRIAVGAPWFLRNVDLHDDLELDS 582
QS+ R GAPW++R+ ++ DL + S
Sbjct: 818 QSKILRTITGAPWYVRSENIQRDLNIPS 845
>U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein.
Length = 724
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 540 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 364
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 100 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 159
Query: 363 SLATKGSTSELTHR-HS 316
S + + SE R HS
Sbjct: 160 SGSAQSDRSESRSRSHS 176
>AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p
protein.
Length = 725
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 540 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 364
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 363 SLATKGSTSELTHR-HS 316
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA
protein.
Length = 725
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 540 EGGTT*EP-SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNP 364
+ GT P SHRS + P + S SP++R GS+ S H + + S
Sbjct: 101 KSGTPESPQSHRSGSLQSRKSGSPQSRRSGSPQSRKSGSTHSRRSGSAHSRRSGSARSRK 160
Query: 363 SLATKGSTSELTHR-HS 316
S + + SE R HS
Sbjct: 161 SGSAQSDRSESRSRSHS 177
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 471 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 316
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 417 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 467
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 471 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 316
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 471 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 316
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 471 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 316
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 416
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 471 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 316
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 471 NGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHS 316
NG P+ + RH S + R H RSPSS + S ++ S+ +H H+
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSHA 473
>U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein.
Length = 2222
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 375 SSNPSLATKG-STSELTHRHSPLSFSPDLLSGSRFRXRW*ILRNT 244
SS PS ATK T + +H P + + +S + R RW L+ T
Sbjct: 1148 SSKPSEATKDFQTIQARPKHPPFNVTERAMSAQQLRVRWIPLQQT 1192
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 9.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 516 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 337
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 336 ELTH 325
+H
Sbjct: 216 RRSH 219
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.1 bits (62), Expect = 9.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 516 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 337
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 336 ELTH 325
+H
Sbjct: 216 RRSH 219
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.1 bits (62), Expect = 9.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 516 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 337
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 70 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 128
Query: 336 ELTH 325
+H
Sbjct: 129 RRSH 132
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.1 bits (62), Expect = 9.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 516 SHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 337
SHR R + R R + + R SS +G RHH H + SSS + A ++
Sbjct: 157 SHRERERDRDR-ERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASV 215
Query: 336 ELTH 325
+H
Sbjct: 216 RRSH 219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,995,177
Number of Sequences: 53049
Number of extensions: 758303
Number of successful extensions: 2488
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2421
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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