Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P05
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 27 2.4
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 27 3.1
SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr 2||... 27 4.1
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 27 4.1
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 26 5.5
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 26 7.2
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 26 7.2
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 26 7.2
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.5
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 25 9.5
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 25 9.5
>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 568
Score = 27.5 bits (58), Expect = 2.4
Identities = 26/115 (22%), Positives = 48/115 (41%)
Frame = -2
Query: 401 AGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRS 222
A A+ +A A +AEA E+ K+++ EP+++ +K+ + R
Sbjct: 89 AAEAEAAAAARAAAAKEAEAKRLEAAKNIVLKEPKDAPAAKKIAIIDSTNFRDSRVRVNG 148
Query: 221 PFGSRRSMLSVFFLTRASRLRRSGYNSVRCRGSE*SVDDFRSWRGIVLGRAASCC 57
R+ + F+ + R G ++C S V D S+ I LG ++ C
Sbjct: 149 WVHRMRTQKGIIFI-----ILRDGTGFLQCVLSG-KVYDRASYDFINLGPESTVC 197
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 64 DAALPSTIPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSR 243
D +PS +P +SS+ S RH + +L S + D LRD + + RVS+
Sbjct: 119 DNLIPSPLPESASRSSSQSSHQRHSRDGRGELGSEHGERRSAMDG--LRDRHIRKVRVSQ 176
>SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 525
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 729 FRSSLCVLNIWIKPAFA 779
FR+ LCV ++WIK A A
Sbjct: 410 FRNPLCVTDVWIKKATA 426
>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 473 AIVILLSXERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEAS 339
A+V+ E +SF L + + A G +K+P A + L S+ E S
Sbjct: 145 AVVLKGGTESAKSFAALSNVVRSALGKSKVPQAAVQLVQSREEVS 189
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 26.2 bits (55), Expect = 5.5
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 25 SPGAGLSLNRSQHDAALPSTIPRQERKSSTDYSEPRHRTELYPDLR-SRDARVKKKTDSI 201
S + S SQH L IP E+KS D S PR + + R R K D+
Sbjct: 134 SSSSSSSSQSSQHSTHLQFQIPSNEKKSLDDPS-PRRKPSFFSKSNLKRKYRYLKNPDAW 192
Query: 202 DL 207
+L
Sbjct: 193 NL 194
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 37 GLSLNRSQHDAALPSTIPRQERKSSTDYSEPRHRTELYPDL 159
G S S +A+L STI + S + SEP+ + E+ L
Sbjct: 226 GASTASSSREASLDSTIKQPLSASLLESSEPKEKEEIVGSL 266
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 634 NAWLPQASYPLVVTFLAPLAKTLYTKGSIGRAFAVPYAY*TFGSSQLL 777
+ W+P YP + T P +GRAFAVP+ +G ++L
Sbjct: 519 DGWIPVMVYPFIDTKQTPF---------MGRAFAVPFIEPKWGRYEIL 557
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 7.2
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Frame = -2
Query: 455 SXERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 276
S +R R + L ++ L S G +S +++ GK+ V P +
Sbjct: 274 SAKRRRPDHNHTSTLDASSSNTSLASTGPMTVSS---STVERKGKEASEVNPNSTSSVTF 330
Query: 275 CDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSVRC-RGSE*SVDDFR 99
DF + +S S+ ++S G R R R +G NS C + V + R
Sbjct: 331 SDFAAAISRSRCSRCKKSKKGCDRQ-------RPCGRCRDAGLNSEDCISDDDMPVSNAR 383
Query: 98 SWRGIVLGR 72
RG GR
Sbjct: 384 KPRGRGRGR 392
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 31 GAGLSLNRSQHDAALPSTIPRQERKSS 111
G LS+ S+ DAALP+ +P E + S
Sbjct: 427 GRPLSIADSECDAALPTVVPELEIEGS 453
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 571 EFCFAMIGRADIEGSKSNVAMNAW--LPQASYPLVVTFLAPLAKTLYTKG 714
E F I R E N NAW + + YPLV LAP A LY G
Sbjct: 406 ETMFPQIARNKTEHVYINHIGNAWFAMSERHYPLVS--LAPEASFLYYNG 453
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 113 VDDFRSWRGIVLGRAASCCDLLRLS 39
VD FR W + SC DLL+LS
Sbjct: 72 VDGFRLWITMEYCDGGSCLDLLKLS 96
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,299,234
Number of Sequences: 5004
Number of extensions: 66315
Number of successful extensions: 177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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