Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P03
(870 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_07_0002 - 27171791-27172222 34 0.17
09_02_0279 + 6702517-6702948 34 0.17
05_06_0281 + 26912419-26913099 32 0.52
02_05_1127 + 34292894-34293284,34293948-34295443 32 0.52
06_03_0447 + 20878444-20878821 31 0.91
04_03_0849 + 20265511-20265984,20266452-20266617,20266694-202669... 31 1.2
03_01_0213 + 1685862-1686059,1686194-1687732 30 2.1
02_02_0063 + 6481568-6481570,6481922-6482470 30 2.8
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 29 4.8
11_01_0763 + 6402901-6403971,6404581-6404826 29 4.8
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 4.8
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 4.8
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 29 4.8
08_01_0488 + 4277482-4277988 29 6.4
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 6.4
02_03_0039 - 14228876-14228878,14229578-14229727,14230457-142306... 29 6.4
06_03_0505 + 21545547-21545813,21546075-21546167,21546535-215467... 28 8.5
04_04_0534 + 26071227-26071811 28 8.5
02_01_0289 - 1937125-1937385,1937570-1937611 28 8.5
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 26 9.6
>11_07_0002 - 27171791-27172222
Length = 143
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 429 TRSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 304
TRS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 54 TRSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 429 TRSTVYRVPTRQAGSGPAGYSGTPAAPSGRPDG----LPYRDGRRF 304
TRS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 54 TRSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>05_06_0281 + 26912419-26913099
Length = 226
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 235 QPDGAAHPKDAQPTEPSRRIEGSKTSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRD 408
+P G P + P P+ + +R+P GP W PG+P T+T L G D
Sbjct: 82 RPVGPTPPPPSHPVVPTPTQLAADDDGGLLRRPGGPTPPSPWHPGVP--TQTQLAGGD 137
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 32.3 bits (70), Expect = 0.52
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = -1
Query: 597 ISRSRXRGPEXGIRPYVPAPCRWRPPPGEGQGAT*GVRPCGALPAL*RAGRGVIRATRST 418
I + R + G R V R R PG G GVRP LP +A RG
Sbjct: 147 IDHTSTRSDDSGEREIVGDGRRRRRRPGRGDVPLAGVRPHDPLPPAVQAPRGEGPRRLLP 206
Query: 417 VYRVPTRQ--AGSGPAGYSGTP--AAPSGRPDGLP 325
++ RQ AG+G S P AA + +GLP
Sbjct: 207 LHAAKPRQAPAGAGEPFRSSPPPAAADADTVEGLP 241
>06_03_0447 + 20878444-20878821
Length = 125
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 217 LPRSTLQPD-GAAHPKDAQPTEPSRRIEGSKTSAVSVRQPVGPPRRCRWCPGIPR 378
LP +TL PD G A R G+K +A S+ P PP R R C +PR
Sbjct: 71 LPLTTLPPDSGGGEGVPASYRRSCRASAGAKATATSILAPQTPPLRHR-CLLLPR 124
>04_03_0849 +
20265511-20265984,20266452-20266617,20266694-20266905,
20267154-20267647,20267732-20267780,20267922-20268251
Length = 574
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 10/48 (20%)
Frame = +1
Query: 316 VSVRQPVGPPRRCRWCPGIPRWTR--------TSLPG--RDAIHRRPG 429
+ + + V PP R WCP RW R +SLPG D +RPG
Sbjct: 1 MEIARVVAPPLRLAWCPASRRWGRRKGRPPCPSSLPGPRHDHAVKRPG 48
>03_01_0213 + 1685862-1686059,1686194-1687732
Length = 578
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/67 (32%), Positives = 26/67 (38%)
Frame = +1
Query: 256 PKDAQPTEPSRRIEGSKTSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRRPGRS 435
P A E RI T A + + GP C W +W R LP R + R G S
Sbjct: 306 PPPAALLERVERIGFRVTHAYGLTEATGPALACEW---RAQWDRLPLPERARLKSRQGVS 362
Query: 436 NHSTASA 456
S A A
Sbjct: 363 VLSLADA 369
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2
Query: 425 GRRCIASRPGRLVLVQRGIPGHQRHRLGGPTGCRTETADVLEPSIRLEG 279
GRR A+RPGRLV + + G +R GP G R A+ + R G
Sbjct: 132 GRRDAATRPGRLVAMAATV-GSRREERRGPAG-RPAPAEAVRTRRRRRG 178
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 142 LNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 285
+ND A H D + G+ PD QP A P+D QP PS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPS 223
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = +3
Query: 201 G*GRGATAVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAARRAAQ 347
G GRGA R RG G DGA + RRL AA R A+
Sbjct: 54 GGGRGAATHQGRRRWRGVGSGGGGDGAATSRRRLARQPAAAVAAARCAR 102
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 396 QAGSGPAGYSGTPAAPSGRPDGLPYRDG 313
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 173 RPIPSEVRTRMR*GGYRGQHYNQTARLTPR 262
R PSE+R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 29.1 bits (62), Expect = 4.8
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 133 AHPLNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAA---HPKDAQPTEPSRRIEGS 303
A P + S L PT+ L P G LPRS A HP+DA P+ PS R +G
Sbjct: 26 ASPEDGSPFLRLPTASDL----PVPAGQLPRSAAVGLIRALNLHPRDASPS-PSSRGDGD 80
Query: 304 KTSAVSVRQPV 336
+ V +P+
Sbjct: 81 VPAGTLVERPI 91
>08_01_0488 + 4277482-4277988
Length = 168
Score = 28.7 bits (61), Expect = 6.4
Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 1/113 (0%)
Frame = -1
Query: 648 DAGGSEKRESSFXFPXXISRSRXRGPEXGIRPYVPAPCRWRPPPGEGQGAT*GVRPCGAL 469
+ GG + P + + PE G P+ A +W+P G+ A
Sbjct: 36 ETGGGPHHNAVLRQPPVMLAAAAGTPEQGSGPHYNAVTQWKPRGGDQLRLPASPPVILAA 95
Query: 468 PAL*RAGRGVIRATRSTVYRVPTRQAGSGP-AGYSGTPAAPSGRPDGLPYRDG 313
+ G G + V R PT G+GP G G D P R G
Sbjct: 96 ASTPEQGNG---PKTNAVLRRPTPPGGAGPREGSGGRGGVIHAVADSAPQRPG 145
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 171 DVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPADGAFEA 290
D + P EP + +A T RR GSP PA A +A
Sbjct: 135 DAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDA 174
>02_03_0039 -
14228876-14228878,14229578-14229727,14230457-14230631,
14231320-14231822
Length = 276
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +3
Query: 378 LDQNQPAGSGRDTPSTGSL*SLHGQRAXVLVARRTASPLXSPLDLHRGEAATYRGPGR 551
L+ N + S R +PS SL HG A V + TA+P SP AA R P R
Sbjct: 15 LNPNPSSHSNRVSPSAVSLRCRHGLTASVRASLSTAAP--SPPPRPAAAAADGRAPKR 70
>06_03_0505 +
21545547-21545813,21546075-21546167,21546535-21546747,
21548933-21549124,21549217-21550197
Length = 581
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 483 ASPLXSPL--DLHRGEAATYRGPGRTGVSPXPAPGXD 587
A+P +P D R +A TYR GR GV+P P D
Sbjct: 332 AAPPATPAWDDFARSKAFTYRILGRAGVTPPPPATSD 368
>04_04_0534 + 26071227-26071811
Length = 194
Score = 28.3 bits (60), Expect = 8.5
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -1
Query: 516 GEGQGAT*GVR-PCGALPAL*RAGRGVIRATRSTVYRVPTRQAGSGPAGYSGTPAAPSGR 340
G Q AT R GA A R GR R R +R P A + T + P G
Sbjct: 75 GCAQAATVAWRHTAGARLATRRRGRRPARRRRDCAWRRPA--AWRWLTTWRRTASKPDGY 132
Query: 339 PDGLPYRDG 313
P G+P DG
Sbjct: 133 PSGMPVPDG 141
>02_01_0289 - 1937125-1937385,1937570-1937611
Length = 100
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 138 PTKRLLCTLTPDVRSPPRSEPG*GRGATAVNTTTRRRGSPQGRPA 272
PT LC + PD SP R P G G + RR G G A
Sbjct: 36 PTSGSLCAMLPDSCSPHR--PQLGVGCRQIGVRRRRTGGMNGSGA 78
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 25.8 bits (54), Expect(2) = 9.6
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +3
Query: 93 HGVVSRPRA-QGF*SPPTKRLLCTLTPDV-----RSPPRSEPG*GRGATAVNTTTRRRGS 254
HG +S PR+ +P +R +TP V RSP P RG A + + RG
Sbjct: 50 HGALSAPRSGDEEITPWWRRSPSAVTPPVYPHVERSP---SPPIARGWPADDDERQERGE 106
Query: 255 PQGRPA 272
P G PA
Sbjct: 107 PSGSPA 112
Score = 20.6 bits (41), Expect(2) = 9.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 345 QTVPLVSRNTPLDQNQPA 398
Q P V ++TPL +PA
Sbjct: 153 QPAPHVEQSTPLPAKEPA 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,015,641
Number of Sequences: 37544
Number of extensions: 526663
Number of successful extensions: 1995
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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