Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_P03
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   2.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   8.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   8.5  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 595 QSQSXPGAGXGDTPVRP 545
           +S+  PG+G GDT + P
Sbjct: 330 KSKGTPGSGDGDTEISP 346


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 444 GVIRATRSTVYRVPTRQAGSG 382
           G++ AT  TV+R   +QAG G
Sbjct: 289 GIVLATGITVHRNSAQQAGVG 309


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 444 GVIRATRSTVYRVPTRQAGSG 382
           G++ AT  TV+R   +QAG G
Sbjct: 289 GIVLATGITVHRNSAQQAGVG 309


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 402 TRQAGSGPAGYSGTPAAPSGRPDGLPY 322
           T +  S P G+      P G+ +G+PY
Sbjct: 588 TFKYSSQPYGFPERLLLPKGKKEGMPY 614


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 405  PTRQAGSGPAGYSG 364
            P+RQ GSG  G+ G
Sbjct: 1923 PSRQTGSGHGGHGG 1936


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 402 TRQAGSGPAGYSGTPAAPSGRPDGLPY 322
           T +  S P G+      P G+ +G+PY
Sbjct: 588 TFKYSSQPYGFPERLLLPKGKKEGMPY 614


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 441 VIRATRSTVYRVPTRQAGSGPA 376
           VI+    TV+R    Q G+GPA
Sbjct: 488 VIKQNTWTVFRDAITQTGTGPA 509


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 381  DQNQPAGSGRDTPSTGSL*SLHGQRAXVLVARRTASPLXSPLDLHRGEAATYRGPGRTGV 560
            +Q Q A S +  P +    +L  Q      +RRT  P    L     E  +YRGP  +G 
Sbjct: 1308 NQQQQASSQQQIPESMRSKALIDQLCRN--SRRTPVPR---LAQDSSEDESYRGPSASGG 1362

Query: 561  SPXP 572
             P P
Sbjct: 1363 RPVP 1366


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -3

Query: 400 PAGWFWSSGVFRDTSGTV 347
           PAGW W    F    G V
Sbjct: 162 PAGWIWGDQGFLKKLGAV 179


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 328 QPVGPPRRCRWCP 366
           +PV PPRR   CP
Sbjct: 336 EPVEPPRRKNNCP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,049
Number of Sequences: 438
Number of extensions: 4667
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)