Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_P02
(815 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54020.2 68414.m06155 myrosinase-associated protein, putative... 31 0.91
At5g18830.2 68418.m02238 squamosa promoter-binding protein-like ... 30 1.6
At1g64340.1 68414.m07291 hypothetical protein 30 2.1
At3g53440.2 68416.m05898 expressed protein 29 2.8
At3g53440.1 68416.m05897 expressed protein 29 2.8
At4g35170.1 68417.m05000 hypothetical protein predicted protein,... 29 3.7
At3g44800.1 68416.m04826 meprin and TRAF homology domain-contain... 29 3.7
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 4.9
At2g32590.1 68415.m03979 barren family protein low similarity to... 28 8.5
At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase... 28 8.5
At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase... 28 8.5
>At1g54020.2 68414.m06155 myrosinase-associated protein, putative
strong similarity to myrosinase-associated proteins
GI:1769968, GI:1769970, GI:1216389,GI:1216391 from
[Brassica napus]; contains InterPro Entry IPR001087
Lipolytic enzyme, G-D-S-L family
Length = 372
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 660 LACGSQAFIATLLFDPSMSALPIIAKQNSPSVGLFT 553
+ C S + + LL P + L I+ QN P+VGLFT
Sbjct: 1 MECSSVSVLGILLVFPLLHNLVTISGQNLPAVGLFT 36
>At5g18830.2 68418.m02238 squamosa promoter-binding protein-like 7
(SPL7) identical to squamosa promoter binding
protein-like 7 [Arabidopsis thaliana] GI:5931635;
contains Pfam profile PF03110: SBP domain
Length = 775
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 523 TVVRQVSFTLLMACRCDSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGL-CLNASKAEA 347
T+V+++ L+ C CD + N +H ++ +K P AGL C +A+
Sbjct: 632 TLVKKMEPDSLVHCTCDCDVRLLHENMDLASDIHRKHQSPIESKDPEAGLDCKERIQADC 691
Query: 346 SLAESGKD 323
S GK+
Sbjct: 692 SPDSGGKE 699
>At1g64340.1 68414.m07291 hypothetical protein
Length = 265
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 742 DCESTAYRSFSIKSFSKRCQKSYHQGITGLWQPSVHS 632
DCEST Y SF + SF+++ + + P + S
Sbjct: 124 DCESTLYDSFELNSFNRQLNSAISSSARSMSMPHLSS 160
>At3g53440.2 68416.m05898 expressed protein
Length = 512
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +3
Query: 105 RKSSTDYSEPRHRTEVYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHC 284
RKS+ +P R+ L++RD++VK + D +P RR RLV S
Sbjct: 4 RKSTVVLPQPIRRSARLISLQNRDSQVKPRKDLGFGSEPTKKTRREVLRGLSKRLVYSSD 63
Query: 285 LEPPDSRGSTVSIS 326
DSR ++IS
Sbjct: 64 SPIEDSRSKKLNIS 77
>At3g53440.1 68416.m05897 expressed protein
Length = 512
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +3
Query: 105 RKSSTDYSEPRHRTEVYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHC 284
RKS+ +P R+ L++RD++VK + D +P RR RLV S
Sbjct: 4 RKSTVVLPQPIRRSARLISLQNRDSQVKPRKDLGFGSEPTKKTRREVLRGLSKRLVYSSD 63
Query: 285 LEPPDSRGSTVSIS 326
DSR ++IS
Sbjct: 64 SPIEDSRSKKLNIS 77
>At4g35170.1 68417.m05000 hypothetical protein predicted protein,
Arabidopsis thaliana
Length = 163
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +3
Query: 39 QG*VSTVSQHXAALPSTTPRQERKSSTDYSEPRHRTEVYPDLRSRDARVKKKTDSIDLRD 218
QG VS H A S+ PR +YS +V+ DL D R + D ++
Sbjct: 47 QGQVSNFQHHSVAESSSYPRSSGPLRNEYSS----VQVH-DL---DRRTHEDEDYDEMDG 98
Query: 219 PNGLRRRVSRF 251
P+ RRR++RF
Sbjct: 99 PDEKRRRITRF 109
>At3g44800.1 68416.m04826 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein
Length = 564
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 108 KSSTDYSEPRHRTEVYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSH 281
K S + +PR R +Y D + + + K+T S+D+ NG + S+ E R+ + H
Sbjct: 142 KESQEVIKPRKRMRLYGDGGAVSSHLHKETSSVDV---NGFQVLPSQAESVKRIFERH 196
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 99 QERKSSTDYSEPRHRTEVYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKS 278
+E K+S D S+ H E + S A KK+ +S+ +D + +S E +++
Sbjct: 95 EEIKASVDESDLTHMREKSAYV-SALAEAKKREESLK-KDVGIAKECISSLEKTLHEMRA 152
Query: 279 HCLEPPDSRGSTVS 320
C E S GST+S
Sbjct: 153 ECAETKVSAGSTMS 166
>At2g32590.1 68415.m03979 barren family protein low similarity to
SP|Q9Y7R3 Condensin complex subunit 2 (p105)
{Schizosaccharomyces pombe}; contains Pfam profile
PF05786: Barren protein
Length = 704
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 81 PSTTPRQERKSSTDYSEPRHRTEVYPDLRSRDARVKKKTDSI-DLRDPNGLRRRVSRFEC 257
P P E KSS + R + + P+L A ++ D ++P L SR C
Sbjct: 450 PDVQPASEIKSSPPAKKTRKKKQAEPELDFAKALEEEMPDIFAPPKNPKTLLLPASRTPC 509
Query: 258 ETRLVKSHCLEP 293
+T+L + +P
Sbjct: 510 QTKLPEDCHYQP 521
>At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 491
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 102 ERKSS-TDYSEPRHRTEVYPDLRSRDA 179
+RKS+ T Y EPR T+V+ + ++RDA
Sbjct: 168 KRKSNPTHYREPRFYTKVFQECQTRDA 194
>At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 475
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 102 ERKSS-TDYSEPRHRTEVYPDLRSRDA 179
+RKS+ T Y EPR T+V+ + ++RDA
Sbjct: 152 KRKSNPTHYREPRFYTKVFQECQTRDA 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,427
Number of Sequences: 28952
Number of extensions: 358347
Number of successful extensions: 939
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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