Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_O18
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    71   3e-12
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    71   3e-12
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    71   3e-12
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    71   3e-12

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 55/186 (29%), Positives = 65/186 (34%), Gaps = 1/186 (0%)
 Frame = -2

Query: 757 KKXFFXXGFFIPXKIXXGGXXSSTRXHIXKPGXXGWXF*XHPFXKSXKIXQFSXGFXVKQ 578
           +K  F     IP KI  G         I KPG                I  FS G  V Q
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGAS-EATLLNMLNISPFSYGLIVNQ 191

Query: 577 XNNFGKXFXPXILEXQPEXFRAXXQXGXGKVXGXFLGXGKPXIGXXPXXXXKGFKXXLAX 398
             + G  F P IL+ +PE  RA  Q G   +    L  G P I   P     GFK  LA 
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251

Query: 397 AXVXXXXFEKXTXXXXXXKXPSXF-XAXXXXXXPSPPXXXGXXKGGKKXXKXGGXXDXXM 221
           A      F++ T      K PS F  A      P+        +  KK        D  M
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDM 311

Query: 220 GFGFFE 203
           GFG F+
Sbjct: 312 GFGLFD 317


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 55/186 (29%), Positives = 65/186 (34%), Gaps = 1/186 (0%)
 Frame = -2

Query: 757 KKXFFXXGFFIPXKIXXGGXXSSTRXHIXKPGXXGWXF*XHPFXKSXKIXQFSXGFXVKQ 578
           +K  F     IP KI  G         I KPG                I  FS G  V Q
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGAS-EATLLNMLNISPFSYGLIVNQ 191

Query: 577 XNNFGKXFXPXILEXQPEXFRAXXQXGXGKVXGXFLGXGKPXIGXXPXXXXKGFKXXLAX 398
             + G  F P IL+ +PE  RA  Q G   +    L  G P I   P     GFK  LA 
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251

Query: 397 AXVXXXXFEKXTXXXXXXKXPSXF-XAXXXXXXPSPPXXXGXXKGGKKXXKXGGXXDXXM 221
           A      F++ T      K PS F  A      P+        +  KK        D  M
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDM 311

Query: 220 GFGFFE 203
           GFG F+
Sbjct: 312 GFGLFD 317


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 55/186 (29%), Positives = 65/186 (34%), Gaps = 1/186 (0%)
 Frame = -2

Query: 757 KKXFFXXGFFIPXKIXXGGXXSSTRXHIXKPGXXGWXF*XHPFXKSXKIXQFSXGFXVKQ 578
           +K  F     IP KI  G         I KPG                I  FS G  V Q
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGAS-EATLLNMLNISPFSYGLIVNQ 191

Query: 577 XNNFGKXFXPXILEXQPEXFRAXXQXGXGKVXGXFLGXGKPXIGXXPXXXXKGFKXXLAX 398
             + G  F P IL+ +PE  RA  Q G   +    L  G P I   P     GFK  LA 
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251

Query: 397 AXVXXXXFEKXTXXXXXXKXPSXF-XAXXXXXXPSPPXXXGXXKGGKKXXKXGGXXDXXM 221
           A      F++ T      K PS F  A      P+        +  KK        D  M
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDM 311

Query: 220 GFGFFE 203
           GFG F+
Sbjct: 312 GFGLFD 317


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 55/186 (29%), Positives = 65/186 (34%), Gaps = 1/186 (0%)
 Frame = -2

Query: 757 KKXFFXXGFFIPXKIXXGGXXSSTRXHIXKPGXXGWXF*XHPFXKSXKIXQFSXGFXVKQ 578
           +K  F     IP KI  G         I KPG                I  FS G  V Q
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGAS-EATLLNMLNISPFSYGLIVNQ 191

Query: 577 XNNFGKXFXPXILEXQPEXFRAXXQXGXGKVXGXFLGXGKPXIGXXPXXXXKGFKXXLAX 398
             + G  F P IL+ +PE  RA  Q G   +    L  G P I   P     GFK  LA 
Sbjct: 192 VYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAI 251

Query: 397 AXVXXXXFEKXTXXXXXXKXPSXF-XAXXXXXXPSPPXXXGXXKGGKKXXKXGGXXDXXM 221
           A      F++ T      K PS F  A      P+        +  KK        D  M
Sbjct: 252 AATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDM 311

Query: 220 GFGFFE 203
           GFG F+
Sbjct: 312 GFGLFD 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,052,017
Number of Sequences: 53049
Number of extensions: 127427
Number of successful extensions: 135
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)