Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_O17
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   7e-13
AL358781-18|CAI40232.1|  282|Homo sapiens uridine-cytidine kinas...    30   8.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 7e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = +2

Query: 287 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 397
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>AL358781-18|CAI40232.1|  282|Homo sapiens uridine-cytidine kinase 1
           protein.
          Length = 282

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = +3

Query: 570 PAWQCPRTGSRGSLNGDERFRHVTTLHAWNETPCARRYYRPRTVSANRVSNETXKVVVFS 749
           PA +  R   R  L GDERF+    L     T C +       +  N V     KVV+ S
Sbjct: 12  PAPEADRPHQRPFLIGDERFQAGIPLLCLQSTVCEKIM---ELLGQNEVEQRQRKVVILS 68

Query: 750 DDR 758
            DR
Sbjct: 69  QDR 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,464,181
Number of Sequences: 237096
Number of extensions: 2635313
Number of successful extensions: 5152
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5152
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)