Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_O10
         (811 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092421-1|BAC03885.1|  216|Homo sapiens protein ( Homo sapiens ...    32   2.1  

>AK092421-1|BAC03885.1|  216|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35102 fis, clone PLACE6006474, weakly similar to
           ADHESIVE PLAQUE MATRIX PROTEIN PRECURSOR. ).
          Length = 216

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +2

Query: 584 PPARVPGRVSGKTSGTLPRELPXRHGPXXAPDWTDPXHPTLPDXNIL 724
           PP+  P  V   T+    R  P  H P   P W+ P  P+LP   +L
Sbjct: 114 PPSLPPDVVLSLTTQPTARRGPFPHHPAYRPTWSFPSPPSLPPDVVL 160



 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +2

Query: 584 PPARVPGRVSGKTSGTLPRELPXRHGPXXAPDWTDPXHPTLPDXNIL 724
           PP+  P  V   T+    R  P  H P   P W+ P  P+LP   +L
Sbjct: 151 PPSLPPDVVLSLTTQPTARRGPFPHHPAYRPTWSFPSPPSLPPDVVL 197



 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +2

Query: 584 PPARVPGRVSGKTSGTLPRELPXRHGPXXAPDWTDPXHPTLPDXNIL 724
           PP+  P  V   T+    R  P  H P   P W+ P  P+LP   +L
Sbjct: 77  PPSLPPDVVLSLTTQPTARRGPFPHYPAYRPTWSFPSPPSLPPDVVL 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,010,927
Number of Sequences: 237096
Number of extensions: 1062413
Number of successful extensions: 3016
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3016
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)