Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_O08
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 743 GSTRHHGQW 717
           G  RHHGQW
Sbjct: 68  GVIRHHGQW 76


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 346 SVTEHTAAGFYDTTR 302
           SV   TAAGF+D  R
Sbjct: 336 SVANFTAAGFFDVKR 350


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 619 HLCACFGENICMHLLMDANFANP 551
           ++C  FG+  C  ++   +FA P
Sbjct: 143 YICYAFGKFSCKVMIQSVSFAFP 165


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 619 HLCACFGENICMHLLMDANFANP 551
           ++C  FG+  C  ++   +FA P
Sbjct: 376 YICYAFGKFSCKVMIQSVSFAFP 398


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 619 HLCACFGENICMHLLMDANFANP 551
           ++C  FG+  C  ++   +FA P
Sbjct: 376 YICYAFGKFSCKVMIQSVSFAFP 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,574
Number of Sequences: 336
Number of extensions: 4285
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)