Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_O03
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_30703| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.96) 30 1.8
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 30 2.4
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 30 2.4
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 30 2.4
SB_26577| Best HMM Match : Vicilin_N (HMM E-Value=1.5) 29 3.2
SB_25756| Best HMM Match : Secretogranin_V (HMM E-Value=7.3) 29 3.2
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 29 4.3
SB_34783| Best HMM Match : Gam (HMM E-Value=0.24) 29 4.3
SB_39777| Best HMM Match : DUF1168 (HMM E-Value=2.2) 29 4.3
SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19) 29 4.3
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 29 5.6
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 28 7.5
SB_46018| Best HMM Match : I-set (HMM E-Value=0.025) 28 7.5
SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12) 28 7.5
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 7.5
SB_39841| Best HMM Match : LamB (HMM E-Value=1) 28 7.5
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_17283| Best HMM Match : rve (HMM E-Value=2.5e-35) 28 7.5
SB_51196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 493 IRELQDSCSGGNSQRYQRNGSQSGGHQSR----ETS*FEEEVLQKLQKAQSHIEHDKTSV 326
++ L+DS + +Q N + G + R E EE ++KLQ + + H+K+
Sbjct: 2936 LKRLRDSLTDAKNQLTTSNNNYEGSERERKRLMEELIHSEEQVKKLQDTCNELLHEKSVA 2995
Query: 325 APQAAAANDT 296
+ + A NDT
Sbjct: 2996 SDKVLALNDT 3005
>SB_30703| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.96)
Length = 204
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = -1
Query: 427 SGGHQSRETS*F--EEEVLQKLQK---AQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKR 263
S GH+ + S EE+V Q ++ +Q H E D + + ++ E + + K
Sbjct: 89 SQGHKEEDVSQGHKEEDVSQGHKEEDVSQGHKEEDVSQGHEEEDVSHGHEEEDVSQGHKE 148
Query: 262 KIVTENAEEQNVGRAHKNEHVPKKIDVAKKEVTAGYQYQNATY 134
+ V+ EE++V + HK E V + +++V+ G++ ++ ++
Sbjct: 149 EDVSHGHEEEDVSQGHKEEDVSQ--GHKEEDVSHGHKEEDVSH 189
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -1
Query: 370 LQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKK 191
L + Q IE K ++A A ND E K A+ R+ + AEE ++ +A K K
Sbjct: 573 LDEQQQLIEKSKETIALATAKCNDIELKMKEAKTYRERELKKAEE-DLKKAKKRAEQSIK 631
Query: 190 IDVAKKEVTAGYQYQ 146
K++ G Q +
Sbjct: 632 ETKTKQQEVEGMQLE 646
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = -1
Query: 394 FEEEVLQKLQKAQSHIEHDK-TSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRA 218
F EE+ + + +S +++DK ++ A+ N +E TK+ +RK+++ EN+ +V +
Sbjct: 265 FPEEIKRNID--ESEMDYDKGINLKQDEASTNCSEVATKSKKRKKEVEDENS---SVKKK 319
Query: 217 HKNEHVPKKIDVAKKE 170
K+E++ + D E
Sbjct: 320 LKSENLMTQDDTGTPE 335
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 355 SHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTE 248
S++E ++TSV + AND+ D +A RK I TE
Sbjct: 1029 SNVEPNETSVNDKCNGANDSSDDNTSAVRKVDIKTE 1064
>SB_26577| Best HMM Match : Vicilin_N (HMM E-Value=1.5)
Length = 649
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = -3
Query: 263 KNRHRKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLPIPERDLRQVLQRNQQY*ADKGQK 84
+N K + ++ + ++T EK R++ + L E +Q++QR+ + + K +K
Sbjct: 454 RNEEEKMKVSEMKDKVVQKTQEEKLSIRQQITEKHLRALENYEQQLMQRDNELRSSKRKK 513
Query: 83 VEETKRER 60
+E+ R+R
Sbjct: 514 LEKVSRQR 521
>SB_25756| Best HMM Match : Secretogranin_V (HMM E-Value=7.3)
Length = 216
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/73 (23%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -1
Query: 367 QKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVG-RAH---KNEHV 200
+ Q+ + H S++ + + + + P T + ++RK+ +E +++QN G R++ +N V
Sbjct: 44 ESLQNQLLHGTPSISIEPPS-DGSRPSTSSPPKERKVKSEQSKKQNKGVRSNYLSENAAV 102
Query: 199 PKKIDVAKKEVTA 161
K ID ++ + +
Sbjct: 103 AKTIDSGRQNIVS 115
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = -1
Query: 481 QDSCSGGNSQRYQRNGSQSGGHQSRETS*FEEEVLQKLQKAQSHIEHDKTSVAPQAAAAN 302
Q S GN+ + + GH + LQKL+ Q HIE +T+ + + +
Sbjct: 205 QTSAKQGNTMSFSSIDNSKHGHANTTREDPRLRHLQKLENVQKHIESSRTASSIGSESKR 264
Query: 301 DTEPDTKTAQRKRKIVTENAEEQNV 227
K + R + + E++ +
Sbjct: 265 KNISKYKPTKSHRNVTYGSLEKKYI 289
>SB_34783| Best HMM Match : Gam (HMM E-Value=0.24)
Length = 347
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = -1
Query: 373 KLQKAQSHIEHDKTSVAPQA----AAANDTEPDTKTAQRKRKIVTEN----AEEQNVGRA 218
+LQKA + +E +KTS+ A + E AQ KI+ + A++QN +
Sbjct: 13 ELQKANARLEEEKTSIEEHAHYLQQLLQEKEDHIAHAQEMNKILKQRVEKLAQKQNPKKN 72
Query: 217 HKNEHVPKKIDVAKKEV 167
+ + K++D+ + +
Sbjct: 73 KDTKELEKRLDILLENI 89
>SB_39777| Best HMM Match : DUF1168 (HMM E-Value=2.2)
Length = 333
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -1
Query: 373 KLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEH-VP 197
K +K Q K A +A ++++ + + +K+K T ++ ++ + + +E +P
Sbjct: 157 KKEKKQKQCREKKRPKAKRALVISESDEEEREFIQKKKKKTTHSNKKPIAVSDSDEEPLP 216
Query: 196 KKI-DVAKKEVTAGYQYQNATY 134
KI + AKK A + +TY
Sbjct: 217 PKIREAAKKNEKAAKSNKKSTY 238
>SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19)
Length = 879
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 203 CSEKNRCREKGGHRRLPIPERDLRQ 129
C+ K RCR+ GG R I ERD Q
Sbjct: 228 CTSKFRCRQCGGKRHTTICERDKGQ 252
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -1
Query: 379 LQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHV 200
LQ+ Q +H K+++ P+A A+ T D A + E V A K + V
Sbjct: 2386 LQQQQILMQQQQHPKSTIHPEAEASQQTIKDQNLAAK------ETLSNSTVCGADKEKLV 2439
Query: 199 PKKIDVAKKEVTAG 158
P K D A++E G
Sbjct: 2440 PVKCD-AEEEAKEG 2452
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -3
Query: 269 ETKNRHRKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLP-IPERDLRQVLQRNQQY 105
+ R + T C AG K C KN C +RR I R L V Q +Y
Sbjct: 7 KASKRKDRNAATLCHAGINKLLCENKNLCVYPRAYRRYARITTRALNIVQQLTTKY 62
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -3
Query: 275 PTETKNR-HRKRRGTK-CRAGPQKRTCSE-KNRCREKGGHRRLPIPERDLRQVLQRNQQY 105
P E KNR H+K+ TK R+ +++T E KN+ +K P + +R +Q
Sbjct: 158 PEEGKNRKHQKKARTKTTRSRQEQKTPEEGKNKNHQKRARIETPEEGEKKKNSRRRQEQK 217
Query: 104 *ADKGQKVEETKRER 60
++G+ + K+ R
Sbjct: 218 TPEEGKNRKHQKKAR 232
>SB_46018| Best HMM Match : I-set (HMM E-Value=0.025)
Length = 1122
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/91 (21%), Positives = 41/91 (45%)
Frame = -1
Query: 463 GNSQRYQRNGSQSGGHQSRETS*FEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDT 284
G+ R G+ +G Q+ + + +++++ + EH+ A Q+ EP+
Sbjct: 479 GSIMRKMDRGTGNGAEQNAKKEEKVVKAEEQVKEIDNKNEHEAIKEAKQSEPPTVAEPEQ 538
Query: 283 KTAQRKRKIVTENAEEQNVGRAHKNEHVPKK 191
R+ VT + E RA+KN+ + K+
Sbjct: 539 PKIMRRNSEVTLSFE----SRANKNQKLLKR 565
>SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12)
Length = 345
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/95 (24%), Positives = 34/95 (35%)
Frame = -1
Query: 556 RRDHCIRIEC*RRNVRSAVF*IRELQDSCSGGNSQRYQRNGSQSGGHQSRETS*FEEEVL 377
R D C RI R V A+ I+ +Q S G + SG + ++
Sbjct: 158 RTDTCKRIP--EREVEVAIEIIQRMQKDSSNGEKANEGIEANASGTARPDTVKSDTRNII 215
Query: 376 QKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQ 272
+ A+ E +T PDTKTA+
Sbjct: 216 PDTETARFETETARTDTEITRHGTETARPDTKTAR 250
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = -3
Query: 275 PTETKNRHRKRRGTKCRAGPQKR------TCSEKNRCREKGGHRRLPIPE 144
P E + R +R +K R P +R + SEK+R + K +R P PE
Sbjct: 387 PMEEERRQSQRATSKQRTNPDRRRKSSPPSASEKDRNQRKDKAKREPTPE 436
>SB_39841| Best HMM Match : LamB (HMM E-Value=1)
Length = 165
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -1
Query: 469 SGGNSQRYQRNGSQSGGHQSRETS*FEEEVL-QKLQKAQSHIEHDKTSVAPQAAAANDTE 293
SGG Q +Q G+QS E + E L Q++ K + T+VA A ND E
Sbjct: 78 SGGEQQCFQTTGAQSKYRLGNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWE 137
Query: 292 PDTKTAQRKRKIVTENAEE 236
T A R+ + +N E
Sbjct: 138 A-TDPAFREANVQGKNLIE 155
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = -1
Query: 394 FEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEE---QNVG 224
FE EV + + ++ E S QAAAA D + Q+K E ++E + +
Sbjct: 918 FESEVDRVFGRKEAKKEAAPGSAPEQAAAAADKPKEEVNKQKKESDKQEESKENEGKEMT 977
Query: 223 RAHKNEHVPKKIDVAKKEVTAGYQYQNATYDKF 125
R K + + ++ + KKE + + A D F
Sbjct: 978 RKEKRKKIKEERNRRKKERKREKRKKKAEMDIF 1010
>SB_17283| Best HMM Match : rve (HMM E-Value=2.5e-35)
Length = 316
Score = 28.3 bits (60), Expect = 7.5
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = -1
Query: 493 IRELQDSCSGGNSQRYQRNGSQSGGHQSRETS*FEEEVLQKLQKAQSHIEHDKTSVAPQA 314
IR D C GN GS G ET ++V Q A S +H T V PQ
Sbjct: 236 IRAHDDICDDGNEPDITVPGSCEQGGTESETMIQSDKV---NQPAASISDHHVTPVKPQD 292
Query: 313 AAANDTEPDTKTAQRKRKIVTE 248
++ T P + +QR K V +
Sbjct: 293 SSVTQT-PVLRRSQRVVKPVVK 313
>SB_51196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -1
Query: 376 QKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHV- 200
++LQ A+ E K+ N+ P K ++ E AEE+ GR H+ H
Sbjct: 138 RRLQPAKREKEKWKSEPILSEFPDNERLPKEKVGSFPN-VLQEPAEERTSGRKHRRAHAR 196
Query: 199 --PKKIDVAKKEVTAG 158
P+ +D + +V G
Sbjct: 197 GDPQTVDELRAQVFMG 212
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,112,525
Number of Sequences: 59808
Number of extensions: 326545
Number of successful extensions: 1302
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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