Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_O03
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.66 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.0  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   3.5  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   4.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   8.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = -1

Query: 388  EEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDT-KTAQRKRKIVTENAEEQNVGRAHK 212
            +E  +KL+K Q   +    +V  +A    + E +  K   R++K+V ++ ++        
Sbjct: 961  QEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQAIITDL 1020

Query: 211  NEHVPKKIDVAKKEVTAGY 155
            +E   KK+ VA  EV   +
Sbjct: 1021 DEEKKKKLKVAWSEVDENF 1039


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
 Frame = -1

Query: 469 SGGNSQRYQRNGSQSGGHQSRETS-----------*FEEEVLQKLQKAQSHIEHDKTSVA 323
           +GG+ +R QR+ + SGG   +  S             +    Q+ Q+ Q H  H     A
Sbjct: 110 AGGSERRVQRDATSSGGRPGQSGSPPDPTRNGIVLHHQAHQQQQQQQQQLHHHHHHHHNA 169

Query: 322 PQAAAANDTEPDTKTAQRK----RKIVTENAEE 236
           P    ++ +E D+     K     K++T+  E+
Sbjct: 170 PAGGESSTSEKDSSRESSKSPMLMKMLTDKQEQ 202


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = -2

Query: 315 PPPLMTPSPIRKRPNGNEKSSPKTQRNKM*GGPTKTNMF 199
           P  ++   P  +RP+ ++   PK Q+      PT  +++
Sbjct: 254 PTRMLNGEPASQRPSSSQMQRPKVQQLDTAAAPTNHHLY 292


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 490 RELQDSCSGGNSQ 452
           RELQ + SGGNSQ
Sbjct: 90  RELQQALSGGNSQ 102


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 74  TKRERLIAKCNVLKI 30
           TK E L +KCN LKI
Sbjct: 66  TKHELLESKCNALKI 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,178
Number of Sequences: 2352
Number of extensions: 10652
Number of successful extensions: 69
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)