Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N24
(809 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_58854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 32 0.63
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 31 0.84
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 31 0.84
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 31 0.84
SB_34248| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42) 31 1.1
SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12) 31 1.5
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53) 30 2.6
SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9) 30 2.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 3.4
SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50335| Best HMM Match : Baculo_11_kDa (HMM E-Value=2.1) 29 4.5
SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30) 29 4.5
SB_217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 29 5.9
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2) 28 7.8
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 28 7.8
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 373 TATNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIA 552
T+ + TS H S TR++ + H SS HK + H ++ H + E +
Sbjct: 51 TSRHETSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHE---TS 107
Query: 553 RHERT 567
RHER+
Sbjct: 108 RHERS 112
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 388 TSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 561
TS H S T R+ + R+H S HK + H K+ H + H R +RHE
Sbjct: 91 TSRHGRSRHKTSRHETSRHERSRHETRQHERSRHKTSRHEKSRHETS--RHER-SRHE 145
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 373 TATNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAE--PEHRR 546
T+ + +S H S T R+ + R+H S HK + H + H + +
Sbjct: 41 TSRHESSPHETSRHETSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHK 100
Query: 547 IARHE 561
+RHE
Sbjct: 101 TSRHE 105
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 388 TSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERT 567
TS H S TR++ + H SS HK + H ++ H + E +RHER+
Sbjct: 16 TSRHETSRHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHE---TSRHERS 72
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 388 TSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 561
TS H S T R+ + R+H S HK + H + H + H R +RHE
Sbjct: 51 TSRHERSRHKTSRHETSRHERSRHETRQHERSRHKTSRHETSRH--EKSRHER-SRHE 105
>SB_58854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 424 TSLTRRYSHTEEANREHLSSTHKHALHRKNL-HPPAEPEHRRIARHERT 567
T T + HTE A+R + H HR + P EP HR ++ T
Sbjct: 27 TKTTPQNQHTEPAHRTSTQNQHTEPAHRTTTQNQPTEPAHRTTTQNHHT 75
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 216 ASSTDCRYWSPALRLHLR*GAPPRRTLCCGRSXPETSTCVP 94
A CR+ P + HL GAPP+ +C + ET C P
Sbjct: 312 AKGWPCRHVRPEVHGHLLQGAPPKAPICGVGTQSETRLCRP 352
>SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 660
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 442 YSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVMTTSECVNFS 618
YS E+ + + + H + R+ LHPP H RI H G + ++V V FS
Sbjct: 359 YSDNEDI-KVLTGNQNPHHVMRQELHPPITARHVRIHPHSWNGSICMRVELIGNSVCFS 416
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = +2
Query: 371 LPQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 550
LP P TTQ T +P TP L T + + T+T T T + P T
Sbjct: 245 LPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTTTQQ 304
Query: 551 PDTNAP 568
P
Sbjct: 305 TTATLP 310
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +1
Query: 340 SQDILPPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLH 519
S + PP L +++ H + + R+ H +R LS+ H+ + H + H
Sbjct: 214 SSSLSPPSSLQSSSPSRHLHCHRPRLSNHHRPSRHHH---CHRPRLSNHHRPSRHL-HCH 269
Query: 520 PPAEPEHRRIARHERTGRLILQV 588
P H R++RH + RL L +
Sbjct: 270 CPRLSNHHRLSRHLHSNRLRLSI 292
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/104 (23%), Positives = 41/104 (39%)
Frame = +1
Query: 289 TGWAATAEVSRPATCTDSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANR 468
T A + P T T P T N + +Y+ S YS ++E +
Sbjct: 37 TTTTAPTTTTAPTTTTAPTTTTAPTTTTTPNNDYNTSDDYSTNNDYSTNNDYSTSDEYST 96
Query: 469 EHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRLILQVMTTS 600
+T + H++ L +H+R +H+R RL + TT+
Sbjct: 97 NDDYNTKQRLQHQRRLQHQQRLQHQRRLQHQR--RLQHKTTTTA 138
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 394 HHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHER 564
HH +++ + + R+ H + NR H H HR + H P P H R
Sbjct: 172 HHHHHHHPSTIIIILRHRHRQHYNRHRRH--HHHHRHRHHHHHPNHPYSHHYPNHHR 226
>SB_34248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 454 EEANREHLSSTHKHALHRKNLHPPAEPEHRRI 549
EE NR+ L+ H L LHPPA+P R +
Sbjct: 56 EEVNRDALTPPSPHPLPVIQLHPPAQPLERSL 87
>SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42)
Length = 495
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 454 EEANREHLSSTHKHALHRKNLHPPAEPEHRRI 549
EE NR+ L+ H L LHPPA+P R +
Sbjct: 347 EEVNRDALTPPSPHPLPVIQLHPPAQPLERSL 378
>SB_52513| Best HMM Match : MAGP (HMM E-Value=0.12)
Length = 1020
Score = 30.7 bits (66), Expect = 1.5
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +2
Query: 314 SHVRLPVQTHKTFYHHANFLPQQIL--PATTQTTILRVPPLLHDVTPTLRKPTANTCQAR 487
S V + + KT + F PQ P T+ TT R P+ + T KP+ +T +
Sbjct: 299 SSVTMTISPQKTATKPSTFQPQSSTRHPLTSITT--RTTPIKPSPSTTPIKPSPSTTPIK 356
Query: 488 TSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYRS*RLQNVSIFLPHGKLACLLVLL 655
S T T I+ +PNT V Y R ++ + G +A ++VLL
Sbjct: 357 PSPSTTSTTPIKP-SPNTTPGVHDRGGRV-QYPQGRDESGMAAITSGVVAAIVVLL 410
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Frame = +2
Query: 329 PVQTHKTFYHHANFLPQQILPATTQTTILRVPPLLHDV----TPTLRKPTANTCQARTST 496
P QT T P P T +T+ + P TPT PT T A T T
Sbjct: 64 PTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTPT 123
Query: 497 HFTGKTCIRQRNPNTAASPDTNAP 568
T KT TA +P T P
Sbjct: 124 KPTPKTPTPTTPTPTAHTPTTPTP 147
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = +2
Query: 392 ATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 568
AT QTT P TPT PT T A T T T T T +P T P
Sbjct: 18 ATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTP 76
>SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53)
Length = 291
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 373 TATNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALH 504
TA + T+ H+N + + T +YS T+ + +H ++ H H
Sbjct: 137 TARHSTARHSNARHSAAQHSTTQYSKTQYSTTQHSAAQHSTTRH 180
>SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9)
Length = 229
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 389 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTC 517
P+ + + PP + DV T +PT TC + T T KTC
Sbjct: 141 PSHARRVLSLSPPYMQDVYFTCHRPTCKTCTSPV-TALTCKTC 182
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +2
Query: 356 HHAN--FLPQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTS----THFTGKTC 517
HH LP Q +P + +L L H+ T T PT T A T+ T+ T
Sbjct: 13 HHQRPPLLPSQQIPHHQRPPLLPSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPAT 72
Query: 518 IRQRNPNTAASPDTNAP 568
P T P T P
Sbjct: 73 TTPTKPTTTTPPATTTP 89
>SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +1
Query: 325 ATCTDSQDILPPCKLLTATNL---TSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKH 495
+TCT PP + A N TSHH N F R SH+ + S T
Sbjct: 326 STCTPGSLARPPLSPINANNTMDQTSHHKNVTFRSPDVPAHRPSHSRSVAAK-ASYTPSG 384
Query: 496 ALHRKNLHPPAEPEHRR 546
+ HR P H+R
Sbjct: 385 SPHRSG--GKVFPRHKR 399
>SB_50335| Best HMM Match : Baculo_11_kDa (HMM E-Value=2.1)
Length = 370
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 434 HDVTPTLRKPTANTCQARTSTHFTG--KTCIRQRNP 535
H++TP + P +CQ T G TCIR +NP
Sbjct: 26 HNITPIPKVPIHGSCQRGNGTKPGGAQATCIRVKNP 61
>SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 446 PTLRKPTANTCQARTSTHF-TGKTCIRQRNPNTAASP-DTNAP 568
PTLR P NT +T+TH+ T + ++ R T +P T+ P
Sbjct: 316 PTLRPPVRNTNTRQTTTHWVTRQRTVKVRETTTPHTPRQTSRP 358
>SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30)
Length = 1440
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -1
Query: 332 QVAGRETSAVAAHPVRENRAD-RLDGXGGRPTG--PPNDEITPPARTADI 192
Q R+ A+ A V++ + +L G RP G PP +E+ P RTADI
Sbjct: 1041 QTIRRDFPALNAAQVQQILGEYQLGGGKTRPRGWFPPPEEVEPALRTADI 1090
>SB_217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 245 PTGPPNDEITPPARTADI 192
PT PP++E TPPA++A +
Sbjct: 435 PTPPPSEEATPPAKSAAV 452
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 317 HVRLPVQTHKTFYHHANFLPQQILPAT--TQTTILRVPPLLHDVTPTLRKPTANTCQART 490
H R H HH ++ + AT T+TTI+ + + T T T T T
Sbjct: 4 HDRHHYHRHHNNIHHHHYATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTT 63
Query: 491 STHFTGKT 514
+T T T
Sbjct: 64 TTTTTTTT 71
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 317 HVRLPVQTHKTFYHHANFLPQQILPAT--TQTTILRVPPLLHDVTPTLRKPTANTCQART 490
H R H HH ++ + AT T+TTI+ + + T T T T T
Sbjct: 126 HDRHHYHRHHNNIHHHHYATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTT 185
Query: 491 STHFTGKT 514
+T T T
Sbjct: 186 TTTTTTTT 193
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 395 TTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNT--AASPDTNAP 568
TT TTI P T KP T + T+T T T + P+T A+S DT++P
Sbjct: 389 TTTTTIAPAPEGTKSNTTVTSKPAWLTQNSNTTT--TTSTIATPKTPDTTAASSADTSSP 446
Query: 569 D 571
+
Sbjct: 447 N 447
>SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 373 TATNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTH-KHALHRKNLHPPAEPEHRRI 549
T T T H +Y T Y+HT+ A E L TH K ALH LH ++
Sbjct: 289 THTKRTLHVLHYTHTKRALHVLHYTHTKRALHE-LHYTHTKRALH--VLHNTHTKRALQV 345
Query: 550 ARHERTGRLILQVMTT 597
+ T R + TT
Sbjct: 346 LNYTHTKRALYTYYTT 361
>SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2)
Length = 332
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 388 TSHHANYNFTGSTSLTRRYSHTEEANREHLS--STHKHALHRKN 513
T+ H + G T+L R SH+E N H + S + ALHRKN
Sbjct: 179 TALHDKSHREGQTAL-HRTSHSEVQNARHRTCYSKDQDALHRKN 221
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -1
Query: 260 GXGGRPTGPPNDEITPPARTADIGAPRSGCTCARVRRLVGHCAVAGP 120
G G PT P P + GAP SG T + G A GP
Sbjct: 544 GTSGAPTSVPPASSAPASGAPPSGAPASGATTPTTGPISGAPASNGP 590
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,835,633
Number of Sequences: 59808
Number of extensions: 530692
Number of successful extensions: 1887
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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