Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_N24
         (809 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g25840.1 68416.m03219 protein kinase family protein contains ...    30   2.1  
At2g04620.1 68415.m00470 cation efflux family protein potential ...    29   2.8  
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate...    29   2.8  
At2g39580.1 68415.m04855 expressed protein                             29   3.7  
At4g36040.1 68417.m05130 DNAJ heat shock N-terminal domain-conta...    28   6.4  
At2g33570.1 68415.m04114 expressed protein                             28   6.4  
At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family...    28   8.4  
At1g60960.1 68414.m06862 metal transporter, putative (IRT3) iden...    28   8.4  

>At3g25840.1 68416.m03219 protein kinase family protein contains
           Pfam profile: PF00069 eukaryotic protein kinase domain
          Length = 935

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 385 LTSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEH 540
           + SHH  ++ + S+S       TE+A++ H    HKH  HR   H   + E+
Sbjct: 7   IESHHRKHHRSSSSS-----DDTEKASKRHKHRHHKHHHHRHRHHRDKKREN 53


>At2g04620.1 68415.m00470 cation efflux family protein potential
           member of the cation diffusion facilitator (CDF) family,
           or cation efflux (CE) family, see PMID:11500563
          Length = 798

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = +1

Query: 394 HHANYNFTGSTSLTRRYSHTEEANREHL-SSTHKHALHRKNLHPPAEPEHRRIARHERT 567
           HH  +  +G T      SH+ +    H  S +HKH  H ++       EH     H  +
Sbjct: 545 HHHAHGGSGCTHSHSHQSHSHKNEEHHQHSDSHKHEEHHQHSDSHKHEEHHEHDHHHHS 603


>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
           similar to glucan endo-1,3-beta-glucosidase precursor
           SP:P52409 from [Triticum aestivum]
          Length = 330

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +2

Query: 338 THKTFYHHANFLPQQILPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTST 496
           T+ T    A F P  I P    TT+  VPP+     PTL  P   T    T T
Sbjct: 39  TNPTTTPTATFPPVTITPTNPATTVPIVPPVTTIPPPTLTPPPVITIPPPTLT 91


>At2g39580.1 68415.m04855 expressed protein
          Length = 1567

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 26/92 (28%), Positives = 33/92 (35%)
 Frame = +1

Query: 388 TSHHANYNFTGSTSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERT 567
           T  H   N TGS  L  +   T+ A    L S HK+       HP   P H R  ++   
Sbjct: 505 TGFHFLNNSTGSIDLATK---TDIAQHSQLESNHKYNSEYVGSHP---PPHSRSGQNLGY 558

Query: 568 GRLILQVMTTSECVNFSSPRXTCLPSCFACLL 663
             L         C N  +    C PS  A +L
Sbjct: 559 SDLGASTSDGLPCGNKQTASRLCSPSSDANIL 590


>At4g36040.1 68417.m05130 DNAJ heat shock N-terminal
           domain-containing protein (J11) identical to dnaJ heat
           shock protein J11 [Arabidopsis thaliana] GI:9843641;
           contains Pfam profile PF00226 DnaJ domain
          Length = 161

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 242 TGPPNDEITPPARTADIGAPRSGCTCA 162
           + PP   I+PP+RTA I  P    +C+
Sbjct: 16  SSPPLSPISPPSRTARISPPLVSASCS 42


>At2g33570.1 68415.m04114 expressed protein
          Length = 496

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 358 PCKLLTATNLTSHHANYNFTGSTSLTRRYSHTEEANREHLSST 486
           PC  +T T  T+  ++ NFT + + T   S T  A  +   ST
Sbjct: 51  PCSAVTTTTTTTLLSSSNFTSAENFTTSLSTTTAAASQKYDST 93


>At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 932

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 295 WAATAEVSRPATCTDSQDILPPCKLLTATNLTSHHANYNFTGST 426
           W    E++   +C DS D + P   L AT +  + ANY    ST
Sbjct: 279 WVIYGELACNGSCPDSSDEISPIYSLWATFIGLYIANYVVERST 322


>At1g60960.1 68414.m06862 metal transporter, putative (IRT3)
           identical to putative metal transporter IRT3
           [Arabidopsis thaliana] gi|17385796|gb|AAL38438; similar
           to iron-regulated transporter 1 [Lycopersicon
           esculentum] gi|9716481|gb|AAF97509; member of the Zinc
           (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563
          Length = 425

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 454 EEANREHLSSTHKHALHRKNLHPP 525
           E++   H+   H HA H ++ HPP
Sbjct: 204 EDSGGIHIVGIHAHAAHHRHSHPP 227


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,804,447
Number of Sequences: 28952
Number of extensions: 337768
Number of successful extensions: 959
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)