Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N19
(784 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 23 2.1
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.8
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 23 2.8
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 23 2.8
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 23 3.6
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 23 3.6
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 21 8.4
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 8.4
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 8.4
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -3
Query: 704 PPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAP 576
P P G+ RSS+P PT P + ++ P K P
Sbjct: 79 PQWPFAWGSLXRSSSPQTSAPTGPPIVRCALRKHKPNRKPRTP 121
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 95 RKKHGEDLPTGGRSRRKGEKLE*MQREEQFCCP*EP 202
++K +D GG S +K + ++ Q+C P P
Sbjct: 557 KRKRKQDPADGGNSMKKCRARYGLDQQNQWCKPCRP 592
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 678 INPIIKSXIPYTNHPRLNIHFHQSPDAVL 592
+ P K +P NH LN+ + P A++
Sbjct: 250 VTPGPKQELPDLNHKPLNLTIKKMPIAIV 278
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 95 RKKHGEDLPTGGRSRRKGEKLE*MQREEQFCCP*EP 202
++K +D GG S +K + ++ Q+C P P
Sbjct: 449 KRKRKQDPADGGNSMKKCRARYGLDQQNQWCKPCRP 484
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 678 INPIIKSXIPYTNHPRLNIHFHQSPDAVL 592
+ P K +P NH LN+ + P A++
Sbjct: 142 VTPGPKQELPDLNHKPLNLTIKKMPIAIV 170
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 614 WKWMLSLGWLVYGIXDLMI 670
+KW+ L W YG LMI
Sbjct: 585 FKWLSFLSWFRYGNGALMI 603
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 614 WKWMLSLGWLVYGIXDLMI 670
+KW+ L W YG LMI
Sbjct: 585 FKWLSFLSWFRYGNGALMI 603
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 453 GAKLVIHHSLENK 491
G + VIHH +ENK
Sbjct: 82 GVRKVIHHLIENK 94
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 453 GAKLVIHHSLENK 491
G + VIHH +ENK
Sbjct: 82 GVRKVIHHLIENK 94
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 528 PSSLGMXKGVSPPYFQVNDESQASRLIS 445
P+S+G+ VS P F+V Q + IS
Sbjct: 21 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 48
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.4 bits (43), Expect = 8.4
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +3
Query: 720 RNRQYXCK-RXKGXXPID 770
RNRQY CK + +G ID
Sbjct: 68 RNRQYVCKAKDEGSCIID 85
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.4
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +3
Query: 720 RNRQYXCK-RXKGXXPID 770
RNRQY CK + +G ID
Sbjct: 68 RNRQYVCKAKDEGSCIID 85
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,060
Number of Sequences: 336
Number of extensions: 3902
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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