Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N18
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 1.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.7
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical... 28 6.8
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 28 6.8
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 28 9.0
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 28 9.0
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 28 9.0
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -1
Query: 702 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTP--Y*KEFAPGLKPPLSSEAPSAYLT 529
P+P + T+T +NP TPTT + +I +P P + P S+ AP+A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 547
Query: 528 PSSLGMXKGVSPL 490
P+S V P+
Sbjct: 548 PTSPTTAPTVPPV 560
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 702 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
P+P + T+T +NP TPTT TS N ++P+ + + AP +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 522 S 520
+
Sbjct: 549 T 549
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 726 VSPLCIKPP-SPAISXTSTRSSNPRFHTPTTPDLTSISI 613
VS C++PP +P + ++T ++ P+ T +T TS +I
Sbjct: 1145 VSMACVRPPTTPTTTTSTTTTTTPKLTTTSTLPSTSTAI 1183
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 708 KPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLT 601
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical
protein Y56A3A.21 protein.
Length = 159
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 741 ALXLAVSPLCIKPPSPAISXTSTRSSNPRFHTPTT 637
AL L S LC K SP S +S +++ FH TT
Sbjct: 7 ALCLVASALCAKCESPKYSASSFSTTDGFFHYKTT 41
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -1
Query: 702 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 541
P+ S ++ + P T TP+LT++++ P+T K + P +++ P+
Sbjct: 160 PATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 702 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTP 526
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 525 SSL 517
++L
Sbjct: 571 TNL 573
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 702 PSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTP 526
P+P I R PR TP L + I+P+ +F P + PP +P A P
Sbjct: 514 PTPPIERHILR---PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNP 570
Query: 525 SSL 517
++L
Sbjct: 571 TNL 573
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 711 IKPPSPAISXTSTRSSNPRFHTPTTPD-LTSISINPLTP 598
+ SPAI T+T +++P+ T TP+ +T++ + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,213
Number of Sequences: 27780
Number of extensions: 303299
Number of successful extensions: 1036
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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