Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N18
(804 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47170.1 68416.m05122 transferase family protein low similari... 35 0.073
At3g24550.1 68416.m03083 protein kinase family protein contains ... 32 0.39
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 31 0.90
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 1.2
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 30 2.1
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 30 2.1
At2g42460.1 68415.m05253 meprin and TRAF homology domain-contain... 29 2.7
At4g29990.1 68417.m04266 light repressible receptor protein kina... 29 3.6
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 29 3.6
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro... 29 3.6
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 29 3.6
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 4.8
At1g33240.1 68414.m04108 trihelix DNA-binding protein, putative ... 29 4.8
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 6.3
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 6.3
At2g27810.2 68415.m03372 xanthine/uracil permease family protein... 28 8.3
At2g27810.1 68415.m03371 xanthine/uracil permease family protein... 28 8.3
>At3g47170.1 68416.m05122 transferase family protein low similarity
to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus
cuspidata GI:6746554; contains Pfam profile PF02458
transferase family
Length = 468
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = -1
Query: 471 NHKLRALLVVIPRILRSPP-PTHPLIEDVVMATNQAIIDYK-VKIADNNLVTHKELALKV 298
N K LV + + SP PT ++ +++ T++ I K + I D NL KE +K+
Sbjct: 222 NDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKI 281
Query: 297 SSIIGTRVYVFDPSC 253
+++ YV+ C
Sbjct: 282 TTVEVLAAYVWRARC 296
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 32.3 bits (70), Expect = 0.39
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Frame = -1
Query: 705 PPSPAISXTSTR-----SSNPRFHTPTTP----DLTSISINPLTPY*KEFAP-----GLK 568
PPSP + T+T SS P TP++P S S P +P P L
Sbjct: 15 PPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLT 74
Query: 567 PPLSSEAPSAYLTPS 523
PPL +PSA +TPS
Sbjct: 75 PPLPQPSPSAPITPS 89
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -1
Query: 705 PPSPAISXTS-TRSSNPRFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 535
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1680 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA 1739
Query: 534 LTPSS 520
+PS+
Sbjct: 1740 YSPSN 1744
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = -1
Query: 732 LAVSPLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 553
L+ SP P S S S S P +P++P S +PL+ +P S
Sbjct: 36 LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPS 95
Query: 552 EAPSAYLTPSS 520
AP + L+PSS
Sbjct: 96 SAPPSSLSPSS 106
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = -1
Query: 726 VSPLCIKPPSPAISXTSTRSSNPRFHTPTT-PDLTSISINPLTPY*KE---FAPGLKPPL 559
V P KPP+P + S + + TPT P TS P TP + P KPP
Sbjct: 102 VQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPT 161
Query: 558 SSEAPSAYLTP 526
S P P
Sbjct: 162 SPVKPPTTTPP 172
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 708 KPPSPAISXTSTRS--SNPRFHTPTTPDLTSISINPLTPY*KE 586
+PP + T ++S +P FH + P+ S+ ++PL+P KE
Sbjct: 29 QPPRRTVQETLSQSPPQSPLFHPQSPPEPKSLPLSPLSPKSKE 71
>At2g42460.1 68415.m05253 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 441
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 444 VIPRILRSPPPTHPLIEDVVMATNQAIIDYKVKIADNNLVTHKEL 310
V P++L PL E+ + N+ II +VK+A+ +T KE+
Sbjct: 273 VEPKMLSFKDYASPLQEEGFLENNKLIIRVEVKVAEEGYLTGKEM 317
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 291 IIGTRVYVFDPSCYFSTPPFDTVLYDNI-RTVLKDNKTALLSASIQASLPSSEIYRQLVD 115
+I TR + + TP FD + N+ +V+ N+TA+++ I + PS I+ LVD
Sbjct: 104 LIRTRFMYGNYDGFSKTPEFDLYIGANLWESVVLINETAIMTKEIIYTPPSDHIHVCLVD 163
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 29.1 bits (62), Expect = 3.6
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = -1
Query: 738 LXLAVSPLCIKPPSPAI-----SXTSTRSSNPRFHTPTTPDLTSISINPLTPY--*KEFA 580
+ LAV P+ PSP+ S ST SS P TP+TP +P +P
Sbjct: 112 MKLAV-PVLAAAPSPSTPSSPPSTPSTPSSPP--STPSTPSSPPSPPSPPSPSLPPSSLP 168
Query: 579 PGLKPPLSSEAPSAYLTPSSLGMXKGVSP 493
P PP + S LTP + +SP
Sbjct: 169 PSASPPTNGTPDSETLTPPPAPLPPSLSP 197
>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
protein low similarity to cinnamoyl ester hydrolase CinI
[Butyrivibrio fibrisolvens] GI:1622732; contains
Interpro entry IPR000379
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -1
Query: 273 YVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLV 118
+V S Y+ T PF T + N+R +K+N+ + A PS I Q +
Sbjct: 10 FVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRI 61
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -1
Query: 678 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 523
+T +S P + +P TP S S P ++AP KP + S P Y TPS
Sbjct: 18 ATVTSYP-YSSPQTPSYNSPSYEHKGP---KYAPHPKPYVKSSPPPQYYTPS 65
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/79 (31%), Positives = 30/79 (37%)
Frame = -1
Query: 720 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 541
P+ PP+P S + P T PD S S + P APG S APS
Sbjct: 107 PVATPPPAPLASPPA---QVPAPAPTTKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPS 163
Query: 540 AYLTPSSLGMXKGVSPLIF 484
G K VS L+F
Sbjct: 164 PTDVNDQNGASKMVSSLVF 182
>At1g33240.1 68414.m04108 trihelix DNA-binding protein, putative
similar to GTL1 [Arabidopsis thaliana] GI:2664198
Length = 669
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 573 LKPPLSSEAPSAYLTPSSLGMXKGVSPLIFK*MMNHKLRALLVVIPR--ILRSPPPTHP 403
L P LSS+ P Y P ++ PL + + ++ IP+ IL PPP+HP
Sbjct: 349 LPPSLSSQPPPPYQPPPAVTKRVAEPPLS---TAQSQSQQPIMAIPQQQILPPPPPSHP 404
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -1
Query: 729 AVSPLCIKPPSPAISXTST-RSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSS 553
A +P +PP ++S +SS+P HTP + S +P TP +P P S
Sbjct: 163 ASAPSKSQPPRSSVSPAQPPKSSSPISHTPALSPSHATSHSPATPSPSPKSP--SPVSHS 220
Query: 552 EAPSAYLTPS 523
+ S TPS
Sbjct: 221 PSHSPAHTPS 230
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 720 PLCIKPPSPAISXTSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 541
P PP PAI T S P TP P T+ P P P L PP ++ P
Sbjct: 108 PAITPPPPPAI--TPPLSPPPPAITPPPPLATTPPALPPKP----LPPPLSPPQTTPPPP 161
Query: 540 AYLTP 526
+TP
Sbjct: 162 PAITP 166
>At2g27810.2 68415.m03372 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 660
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 530 PPRHWAWXKGFRPLFSSE 477
PP WA GFRP FS E
Sbjct: 25 PPSSWAKKTGFRPKFSGE 42
>At2g27810.1 68415.m03371 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 709
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 530 PPRHWAWXKGFRPLFSSE 477
PP WA GFRP FS E
Sbjct: 25 PPSSWAKKTGFRPKFSGE 42
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,181,282
Number of Sequences: 28952
Number of extensions: 302549
Number of successful extensions: 938
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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