Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_N17
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    29   5.2  
U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.1  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.1  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = -2

Query: 726 RPYASSHPPLRSRXHQPRSSNPRFHTPTTPDLTSISINPLTPY 598
           RPY    PP  S  H   ++    + P  P  T    NP  PY
Sbjct: 172 RPYPPQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNPRVPY 214


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
 Frame = -2

Query: 723 PYAS--SHPPLRSRXHQPRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 550
           PY S  S+P  +   + P +  P F   + P   +  +NP+ P      P   P LSS  
Sbjct: 412 PYYSPPSYPTQQQSSYVPSAVPPMFSATSAPTPPTSYVNPIPPPAPLNFP--MPSLSSIG 469

Query: 549 PSAYLTPSSLGMAKGVSPPYFQVNDESQ 466
            +   TP   G A    PP F    + Q
Sbjct: 470 ITQLATPPVPG-ATSYQPPSFPPQQQQQ 496


>U80448-6|AAO12417.1|  687|Caenorhabditis elegans Hypothetical
           protein F59A3.2b protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -2

Query: 663 PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSLGMAKGVSPPYF 487
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 486 QVNDESQASRLISR 445
            V ++      ++R
Sbjct: 585 YVPNQESFDESVNR 598


>U80448-5|AAB37819.1|  975|Caenorhabditis elegans Hypothetical
           protein F59A3.2a protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -2

Query: 663 PRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSLGMAKGVSPPYF 487
           PR     TP L  + I+P+     +F P + PP    +P  A   P++L      S P  
Sbjct: 525 PRVTLLPTPTLVFVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNT 584

Query: 486 QVNDESQASRLISR 445
            V ++      ++R
Sbjct: 585 YVPNQESFDESVNR 598


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 567  PLSSEAPSAYLTPSSLGMAKGVSPP 493
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 567  PLSSEAPSAYLTPSSLGMAKGVSPP 493
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
            protein M70.1 protein.
          Length = 931

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
 Frame = -2

Query: 696  RSRXHQPRSSNPRFHTPT--TPDLTSISINPLTPY*KEFAPGLK-PPLSSEAPSAYLTPS 526
            + +  +P +  P+   P   TP    + + P  P   E    +      +E P   +TP 
Sbjct: 812  KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETEKPKTEVTPK 871

Query: 525  SL--GMAKGVSPPYFQVNDESQASRLISRHSTHT 430
                  A  V     +  D+S A   IS+  THT
Sbjct: 872  PAHKSAASKVDATNTKTEDQSSAQNCISQSMTHT 905


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,894,778
Number of Sequences: 27780
Number of extensions: 346556
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)