Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N17
(811 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 5.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 5.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 5.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 5.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 7.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHDFQHTSSRY 231
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 531 PSSLGMAKGVSPPYFQVNDESQASRLIS 448
P+S+G++ VS P F+V Q + IS
Sbjct: 174 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 201
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 196 SKKYATSSNSLRSRTHGFQHTSSRY 220
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 196 SKKYATSSNSLRSRTHGFQHTSSRY 220
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LRSR H + ++ R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 531 PSSLGMAKGVSPPYFQVNDESQASRLIS 448
P+S+G++ VS P F+V Q + IS
Sbjct: 113 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 140
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 7.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 729 SRPYASSHPPLRSRXHQPRSSNPRF 655
S+ YA+S LR+R H + ++ R+
Sbjct: 207 SKKYATSSNSLRNRTHDFQHTSSRY 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,688
Number of Sequences: 438
Number of extensions: 4817
Number of successful extensions: 31
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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