Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_N16
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609...    31   1.2  
01_06_0581 - 30386018-30386440                                         29   4.7  
01_06_0769 - 31833788-31834182,31834277-31834352,31834458-31834463     29   6.3  

>02_04_0591 -
           24159654-24160155,24160233-24160316,24160898-24160944,
           24161035-24161103,24161259-24161310,24161693-24161775,
           24162312-24162422,24162808-24163211,24163308-24163380,
           24163460-24163510,24163882-24164073,24164176-24164302,
           24164753-24164934,24165023-24165226,24165738-24165836
          Length = 759

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 515 SSGGRQGIRGEQNPXAPRXEHGXPGRPSRVAGGAVSGK 628
           SSGG+  ++GE  P   R +   PGR  +VAG AV+G+
Sbjct: 682 SSGGKD-LKGESKPSEGRAK---PGRKPKVAGAAVAGE 715


>01_06_0581 - 30386018-30386440
          Length = 140

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 271 SGVRSQVLERLEMRLRSGGGGARRQ 345
           SG+  +V +R+E   R GGGG RR+
Sbjct: 31  SGIEVKVRKRVEKEARMGGGGRRRR 55


>01_06_0769 - 31833788-31834182,31834277-31834352,31834458-31834463
          Length = 158

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = +3

Query: 504 TSGGLVAGGK----ASAESRIXEHPGXNTAARAAHPVLP 608
           T GG+VAGG     A  ++    HPG    A AAH   P
Sbjct: 71  TGGGVVAGGTVHVLAQQQNYHQYHPGAGVQAHAAHAARP 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,578,480
Number of Sequences: 37544
Number of extensions: 293238
Number of successful extensions: 1077
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)