Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N14
(810 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 2e-13
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 7e-10
SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26) 46 3e-05
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 37 0.017
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 1.5
SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 30 2.6
SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7) 29 3.4
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.5
SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2) 29 4.5
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 28 7.8
SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011) 28 7.8
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 73.7 bits (173), Expect = 2e-13
Identities = 47/140 (33%), Positives = 67/140 (47%)
Frame = -2
Query: 788 FDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSG 609
FD PGF K F +A+ EEREHA K + RG G + + P W G
Sbjct: 171 FDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCG 226
Query: 608 ASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTL 429
++ AL LE V ++ ++ K E D + D+L +L EQ + ++LAG + L
Sbjct: 227 QDVIQAALDLEKHVNQALHDLHKVAE-KHGDSQMQDWLESHYLTEQVEAIKELAGHMTNL 285
Query: 428 KKMMDKHAALGEFIFDKKLL 369
K++ LGEF FDK L
Sbjct: 286 KRV---GPGLGEFQFDKHTL 302
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 72.9 bits (171), Expect = 3e-13
Identities = 48/140 (34%), Positives = 67/140 (47%)
Frame = -2
Query: 788 FDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSG 609
FD PGF K F A+ EEREHA K + RG G + + P W G
Sbjct: 156 FDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCG 211
Query: 608 ASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTL 429
A++ AL LE V ++ ++ K E D + D+L +L EQ + ++LAG + L
Sbjct: 212 QDAIQAALDLEKHVNQALLDLHKVAE-KHGDSQMQDWLESHYLTEQVEAIKELAGHLTNL 270
Query: 428 KKMMDKHAALGEFIFDKKLL 369
K++ LGEF FDK L
Sbjct: 271 KRV---GPGLGEFQFDKLTL 287
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 72.9 bits (171), Expect = 3e-13
Identities = 45/141 (31%), Positives = 70/141 (49%)
Frame = -2
Query: 788 FDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSG 609
FD PGF K F A+ EEREHA K + + RG G + + P W G
Sbjct: 224 FDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERG---GRIV-LQDIKKPEKDEWGCG 279
Query: 608 ASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTL 429
+++ AL LE V ++ ++ K E D + D++ G FL EQ + ++LAG + L
Sbjct: 280 MDSIQVALDLEKHVNQALLDLHKIAE-KHGDAQMTDFIEGNFLTEQVEAIKELAGHLTNL 338
Query: 428 KKMMDKHAALGEFIFDKKLLG 366
K++ LGE+ +D + +G
Sbjct: 339 KRV---GPGLGEYQYDHETIG 356
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/133 (33%), Positives = 68/133 (51%)
Frame = -2
Query: 764 PGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSGASALEHAL 585
PGFA F AA EE HA + +L RG G V + P W +G A+ AL
Sbjct: 12 PGFAAFFKKAAEEEYTHAHMFMEFLNKRG---GRVKLHHIMK-PCRDHWGNGLMAMRDAL 67
Query: 584 KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHA 405
LE ++ +++ ++ + +++ D + D+L FL EQ + LA STL+++
Sbjct: 68 YLEKEINHALLDLHQVADTN-RDPQVQDFLESNFLGEQVDSIKTLANYVSTLQRL---GG 123
Query: 404 ALGEFIFDKKLLG 366
LGE+ FDK+ LG
Sbjct: 124 GLGEYQFDKETLG 136
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 61.7 bits (143), Expect = 7e-10
Identities = 47/142 (33%), Positives = 64/142 (45%)
Frame = -2
Query: 791 FFDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXS 612
+FD PGF K F A EEREHA K P W S
Sbjct: 36 YFDREDVHLPGFHKFFKKQAHEEREHAEK----------------------KPERDEWGS 73
Query: 611 GASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKAST 432
G A++ AL LE V ++ E+ KT E + D + D++ FL EQ + R+L+G +
Sbjct: 74 GLEAMQTALDLEKHVNQALIELEKTAEKN-GDAQMSDFIEDHFLTEQVESIRELSGYIAV 132
Query: 431 LKKMMDKHAALGEFIFDKKLLG 366
LKK+ LG + FD + LG
Sbjct: 133 LKKV---GPGLGVYQFDHETLG 151
>SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)
Length = 175
Score = 46.4 bits (105), Expect = 3e-05
Identities = 35/119 (29%), Positives = 62/119 (52%)
Frame = -2
Query: 728 EEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSGASALEHALKLESDVTNSIRE 549
EEREH K Y+ G + +VT ++ + S E AL+ E VT+++ +
Sbjct: 58 EEREHFLKVFKYITEMGGI--AVTPSVS---EVQQEFASFREVFEIALQNEIAVTHAVNK 112
Query: 548 VIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKL 372
VI C NDY +++ ++ EQ + +R+ A +A L ++D+ +A G+F DK++
Sbjct: 113 VIAKCRQE-NDYATEEFMMW-YVKEQREEERN-ARRALELFDLIDEDSATGKFQLDKEI 168
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/75 (36%), Positives = 34/75 (45%)
Frame = -2
Query: 788 FDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSG 609
FD PGF K F A+ EEREHA K + RG G + + P W G
Sbjct: 39 FDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCG 94
Query: 608 ASALEHALKLESDVT 564
A++ AL LE+ T
Sbjct: 95 QDAIQAALDLENTST 109
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -2
Query: 737 AAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXSGASALEHALKLESDVTNS 558
A+ EEREHA K + RG G + + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 557 IREVIKTCE 531
+ ++ K E
Sbjct: 59 LHDLHKVAE 67
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = -2
Query: 614 SGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 492
S A+ LEH L+ E++ N +R+ T SS N+Y V+YL+
Sbjct: 1824 SKAADLEHRLETEANDKNKLRQENITLASSLNEYK-VNYLT 1863
>SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = -1
Query: 609 RISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGIPRRT---------VQGPT 457
R PR RP + ++ HQ+ R + +R PP RG PR++ QG
Sbjct: 53 RRRPRPRPNSEGKEGEEADHEHQEERPRGRRPPPWWRRRRGPPRKSDSAEHSGADSQGEG 112
Query: 456 RPRRQGLDPQEDDGQTRRPRRVHLRQ-ETPRIE 361
+++G +E + + RRPRR R+ PR E
Sbjct: 113 N-KQEGSAEEEREQRPRRPRRPRFRKSRQPRSE 144
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 29.9 bits (64), Expect = 2.6
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Frame = -1
Query: 678 KADRLRNRXHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRL 499
K R NR Q RK + + S + + QAG P H+ Q P +
Sbjct: 229 KTKRQANRKTKRQANRKT---KGQASHKTKGQAGRKIKISKPQNHKQAPRPRQASPKTK- 284
Query: 498 FVRGIPRRTVQGPTRPRRQG-----LDPQEDDGQTRRPRRVHLRQETPR 367
+ P+ P RPR+ PQ+ D Q RPR+ L+ +T +
Sbjct: 285 -GQASPKTKSTKPARPRQASPKAKTSKPQDQDKQVARPRQSSLKTKTSK 332
>SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -2
Query: 557 IREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTL--KKMMDKHAALGEFIF 384
+R V T E ++D H DY S YKG + L K K L EF F
Sbjct: 6 VRVVSDTVELLWSDGHATDYKSSWLAQHAYKGNKKLRVKEELFLWDKERINSTTLPEFSF 65
Query: 383 D 381
D
Sbjct: 66 D 66
>SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7)
Length = 488
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 612 RRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFV-RGIPRRTVQGPTRPRRQG 439
R+ PR P A + + ++ P ++ L R PP + V +PR T PT RRQG
Sbjct: 429 RKHMPRRSPPAYKPQLKESPKVNRIRDAHLLRPPPPLVRVAEDVPRNTDTSPTLSRRQG 487
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -1
Query: 642 QGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLFVRGIPRRTVQG 463
QGP ++ P +P + ++Q PGG Q ++ PP +G P+R
Sbjct: 449 QGPPSQSTPSQQAPPTKQPMQPQHQYQARPGG----PPQQRQYPPSSTPQQGFPQRPGSP 504
Query: 462 PT 457
PT
Sbjct: 505 PT 506
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 4.5
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Frame = -1
Query: 639 GPRKHVVGERRISPR-ARPQAGE*RHQQHPGGHQ------DLREQLQRLPPGRLFVRGIP 481
G R V+ + RISP AR ++ E R P Q +RE R + F
Sbjct: 1587 GLRPEVIADSRISPYDARVKSVEQRPDPQPHRDQRRDVIKGIRESEHRFTDPQSFTHHDS 1646
Query: 480 RRTV-QG-PTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERI 355
R+ + QG P R +PQ+ + R R V ++ R+ERI
Sbjct: 1647 RQDLHQGVPVADSRHRSEPQQANEVERTERPVITLEQERRVERI 1690
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 652 SSRTGPPQTRRGXAAHQPSSTPSS 581
++RTGPPQ+R+ H+ S+T S
Sbjct: 419 ANRTGPPQSRQAVPRHRTSATADS 442
>SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2)
Length = 919
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -2
Query: 587 LKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKH 408
L+LE +VT S+R+ +S+F+ V GE D Q +A ++ +H
Sbjct: 557 LRLEGEVTISLRK-----QSTFSSLAQVRIFIGE--DPTSSRQPSYRVQAPATTWILKQH 609
Query: 407 AALGEFIFDK 378
+L EFIFD+
Sbjct: 610 ESLSEFIFDE 619
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 447 RQGLDPQEDDGQTRRPRRVHLRQETPR 367
R+ PQ+ D Q RPR+ RQ PR
Sbjct: 41 RKTSKPQDQDKQAARPRQARTRQARPR 67
>SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011)
Length = 318
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -2
Query: 569 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 474
+ ++ EV E NDY ++DY+ +F ++
Sbjct: 187 INEALEEVSSDAEKQANDYEIIDYMMHKFKEQ 218
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,883,056
Number of Sequences: 59808
Number of extensions: 420560
Number of successful extensions: 1050
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -