Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_N14
         (810 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    55   5e-08
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    55   5e-08
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ...    55   6e-08
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin...    51   8e-07
At2g19410.1 68415.m02264 protein kinase family protein contains ...    29   2.8  
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei...    28   8.4  
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei...    28   8.4  
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex...    28   8.4  

>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
 Frame = -2

Query: 791 FFDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRG---KLTGSVTDXITYRAPANTS 621
           +FD       G AK F +++ EEREHA   + Y   RG   KL   V     +  P    
Sbjct: 119 YFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEK-- 176

Query: 620 WXSGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGK 441
                 A+E AL LE  V   +   + +  S  +D  L D++   FL+EQ +  + ++  
Sbjct: 177 -GDALYAMELALSLEKLVNEKLLN-LHSVASKNDDVQLADFIESVFLNEQVEAIKKISEY 234

Query: 440 ASTLKKMMDKHAALGEFIFDKKLLG 366
            S L+++   H   G + FD++LLG
Sbjct: 235 VSQLRRLGKGH---GTWHFDQELLG 256


>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 39/141 (27%), Positives = 64/141 (45%)
 Frame = -2

Query: 791 FFDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXS 612
           +FD       G AK F +++ EEREHA K + Y   RG      +  +      +     
Sbjct: 121 YFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGD 180

Query: 611 GASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKAST 432
               +E AL LE  V   +   + +  S  ND HL D++  EFL EQ +  + ++   + 
Sbjct: 181 ALYGMELALSLEKLVNEKLLN-LHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQ 239

Query: 431 LKKMMDKHAALGEFIFDKKLL 369
           L+++   H   G + F++ LL
Sbjct: 240 LRRVGKGH---GTWHFNQMLL 257


>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
           subunit cowpea2 precursor GI:2970654 (Vigna
           unguiculata); contains Pfam profile PF00210:
           Ferritin-like domain
          Length = 253

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 41/141 (29%), Positives = 65/141 (46%)
 Frame = -2

Query: 791 FFDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRGKLTGSVTDXITYRAPANTSWXS 612
           +FD       GFAK F D++ EER HA   + Y   RG      +  +      +     
Sbjct: 113 YFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGD 172

Query: 611 GASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKAST 432
              A+E AL LE  +TN     +++     ND  LVD++  EFL EQ +  + ++   + 
Sbjct: 173 ALHAMELALSLEK-LTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQ 231

Query: 431 LKKMMDKHAALGEFIFDKKLL 369
           L+++   H   G + FD+ LL
Sbjct: 232 LRRIGKGH---GVWHFDQMLL 249


>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
           [Arabidopsis thaliana] GI:1246401, GI:8163920
          Length = 255

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
 Frame = -2

Query: 791 FFDXXR*XXPGFAKXFXDAAXEEREHATKXIXYLXMRG---KLTGSVTDXITYRAPANTS 621
           +FD       G AK F +++ EER HA K + Y   RG   KL   V+    +    +  
Sbjct: 118 YFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFE---HAE 174

Query: 620 WXSGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGK 441
                 A+E AL LE      +  V K   S  ND  L D++  EFL EQ +  + ++  
Sbjct: 175 KGDALYAMELALSLEKLTNEKLLNVHKVA-SENNDPQLADFVESEFLGEQIEAIKKISDY 233

Query: 440 ASTLKKMMDKHAALGEFIFDKKLL 369
            + L+ +   H   G + FD+ LL
Sbjct: 234 ITQLRMIGKGH---GVWHFDQMLL 254


>At2g19410.1 68415.m02264 protein kinase family protein contains
           Pfam profile: PF00069 Eukaryotic protein kinase domain
          Length = 801

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 641 RAPANTSWXSGASALEHAL-KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 474
           R+P  TS  S    +E  + +L++++ +++ +  + CE  F+  + V  LS E+L+E
Sbjct: 297 RSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNE 353


>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 294

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 614 SGASALEHALKLESDVTNSIREVIKTCESSFN 519
           S  S   H LKL S  T+++R +  +  SSFN
Sbjct: 37  SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68


>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 369

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 614 SGASALEHALKLESDVTNSIREVIKTCESSFN 519
           S  S   H LKL S  T+++R +  +  SSFN
Sbjct: 37  SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68


>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 727

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = -1

Query: 486 IPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRVHLRQETPRIERINILHVTPPLRSNP 316
           +P R V  P  P+     PQ +D   + P +       P+    +++H  PP  S P
Sbjct: 401 VPTRPVHKPQPPKES---PQPNDPYNQSPVKFRRSPPPPQQPHHHVVHSPPPASSPP 454


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,421,000
Number of Sequences: 28952
Number of extensions: 280763
Number of successful extensions: 684
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)