Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N12
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 254 6e-68
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 247 9e-66
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 33 0.34
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 33 0.34
01_04_0047 - 15408802-15409068,15409418-15409478,15409516-154096... 33 0.34
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 31 1.0
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 31 1.0
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 31 1.0
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 31 1.0
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 31 1.0
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 31 1.0
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 31 1.0
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 31 1.0
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 31 1.0
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 31 1.0
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 31 1.0
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 31 1.0
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 31 1.0
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 31 1.0
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 31 1.0
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 31 1.0
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 31 1.0
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 31 1.0
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 31 1.0
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 31 1.4
11_04_0146 - 14091671-14092357,14092996-14093229 31 1.4
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 31 1.4
03_04_0018 - 16484109-16484300,16484575-16484656,16484746-164848... 31 1.4
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916... 30 1.8
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.2
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 29 5.6
04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329 29 5.6
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 7.4
06_01_0604 - 4358278-4358442,4358835-4358943,4359236-4359331,435... 28 7.4
04_01_0592 + 7808821-7809210 28 7.4
02_02_0673 + 12828500-12828697,12828986-12829162,12830600-128310... 28 7.4
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 254 bits (622), Expect = 6e-68
Identities = 116/170 (68%), Positives = 136/170 (80%)
Frame = -1
Query: 624 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKK 445
KGKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVS+T ARAGQ GYHHRTEMNKK
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 444 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 265
+Y+IG K G+ + A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR
Sbjct: 285 VYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR 338
Query: 264 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = -3
Query: 748 IQLNGVPSRTK*NGPENIWRXXIPVDSVFAQDEMIDCIGVTQGQ 617
IQ+NG K + + IPVD+VF +DEMID IGVT+G+
Sbjct: 184 IQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 247 bits (604), Expect = 9e-66
Identities = 112/162 (69%), Positives = 132/162 (81%)
Frame = -1
Query: 624 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKK 445
KGKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVS+T ARAGQ GYHHRTEMNKK
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK 284
Query: 444 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 265
+Y+IG K G+ + A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR
Sbjct: 285 VYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR 338
Query: 264 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 139
++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = -3
Query: 748 IQLNGVPSRTK*NGPENIWRXXIPVDSVFAQDEMIDCIGVTQGQ 617
IQ+NG K + + IPVD+VF +DEMID IGVT+G+
Sbjct: 184 IQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGK 227
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ R++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 677 GIFFISFRDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 735
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ R++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 747 GIFFISFRDLYALYKLDKMDVNLVATFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 805
>01_04_0047 -
15408802-15409068,15409418-15409478,15409516-15409626,
15409707-15409958,15410044-15410270,15410971-15411230,
15411373-15412279,15412370-15412567
Length = 760
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ R++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 503 GIFFISFRDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 561
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 756 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTRAKVGYVDPTRICKTQHTVEL 814
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 691 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 749
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 627 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 685
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 707 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 765
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 700 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 758
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 761 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 819
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 696 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 754
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 696 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 754
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 751 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 809
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTVEL 841
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKPQHTVEL 841
>11_04_0146 - 14091671-14092357,14092996-14093229
Length = 306
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 618 KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAW 523
K YK T RWH K++ K K KV +W
Sbjct: 266 KIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSW 297
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C +T++L
Sbjct: 783 GIFFISFQDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTIEL 841
>03_04_0018 -
16484109-16484300,16484575-16484656,16484746-16484856,
16484937-16485188,16485274-16485677,16486035-16486952,
16486990-16487475,16487566-16487763
Length = 880
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 578 FFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
FF+ R++ LY L D N V F L + H DR + P +C +TV+L
Sbjct: 643 FFISFRDLYALYKLDKMDVNLVAAFCLMQFHEADRTGAKVRYVDPTRICKTQHTVEL 699
>06_01_1113 -
9164953-9165044,9166453-9166586,9166624-9166734,
9166815-9167066,9167152-9168186,9168313-9169187,
9169476-9169673
Length = 898
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ R++ LY L D N V F L + H DR + P +C + V+L
Sbjct: 675 GIFFISFRDLYALYKLDKMDVNHVAAFCLMQFHEADRTGAKVGYIDPTRICKTQHIVEL 733
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 372 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 277
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -1
Query: 516 SRVSFTAARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 367
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 366 SEKSITPMGGFPHYGEVNN 310
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
>04_03_0033 + 9936723-9937019,9937621-9937754,9938966-9939329
Length = 264
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 618 KGYKGVTSRWHTKKLPRKTHKGLRKV 541
K YK T RWH K++ K K KV
Sbjct: 29 KIYKDKTKRWHDKRIKHKEFKAREKV 54
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 FFFFFFALSNVYFHGLHLRL 60
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
>06_01_0604 -
4358278-4358442,4358835-4358943,4359236-4359331,
4359823-4359956,4360639-4360905,4361225-4361310,
4361409-4361501,4361601-4361696,4361986-4362093,
4362473-4362493,4363856-4364156
Length = 491
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = +3
Query: 624 WVTPMQSIISSWANTESTGIXFLQMFSGPFHFVLDG-----TPLSW 746
W+ QSI++SW S + GPFH DG P SW
Sbjct: 97 WLNGGQSIVTSWPGCSSIAYGVAEEV-GPFHVNADGQGVHLNPYSW 141
>04_01_0592 + 7808821-7809210
Length = 129
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 630 SPKGKGYKGVTSRWHTKKLPRKTHKGLRKV 541
S K YK T RWH K++ K K L KV
Sbjct: 25 SHNAKIYKERTKRWHDKRIKIKKFKPLDKV 54
>02_02_0673 +
12828500-12828697,12828986-12829162,12830600-12831021,
12831107-12831358,12831439-12831549,12831639-12831720,
12831997-12832167
Length = 470
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 572 GSFFVCQREVTPLYPLPLGDTNAVNHFILGK-HRIDRDXXSPDVLWPISLCPRWYTVKL 745
G FF+ +++ LY L D N V F L + H DR + P +C + V+L
Sbjct: 238 GIFFISFQDLYALYKLDKMDVNLVAVFCLMQFHEADRTGAKVGYVDPTRICKTQHIVEL 296
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,296,173
Number of Sequences: 37544
Number of extensions: 487816
Number of successful extensions: 1299
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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