Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N12
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 277 7e-75
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 277 7e-75
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 277 7e-75
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 277 7e-75
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 277 7e-75
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 277 7e-75
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 276 2e-74
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 276 2e-74
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 33 0.18
U23175-3|AAC46712.2| 959|Caenorhabditis elegans Anion/bicarbona... 28 8.8
U23175-2|AAM98009.1| 797|Caenorhabditis elegans Anion/bicarbona... 28 8.8
U23175-1|AAZ91355.1| 826|Caenorhabditis elegans Anion/bicarbona... 28 8.8
AY887905-1|AAX34417.1| 959|Caenorhabditis elegans anion transpo... 28 8.8
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 277 bits (679), Expect = 7e-75
Identities = 135/229 (58%), Positives = 167/229 (72%)
Frame = -1
Query: 783 VKQRQKKAHIMXSNLTVYHRGQSEMGQRTSGEXXSLSILCLPKMK*LTALVSPKGKGYKG 604
+++RQKKAH++ + Q R E + + + + +G G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIYRIGQG 424
VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N KIYRIG+
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKS 290
Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKS
Sbjct: 291 ALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
L TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 348 LITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 277 bits (679), Expect = 7e-75
Identities = 135/229 (58%), Positives = 167/229 (72%)
Frame = -1
Query: 783 VKQRQKKAHIMXSNLTVYHRGQSEMGQRTSGEXXSLSILCLPKMK*LTALVSPKGKGYKG 604
+++RQKKAH++ + Q R E + + + + +G G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIYRIGQG 424
VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N KIYRIG+
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKS 290
Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKS
Sbjct: 291 ALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
L TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 348 LITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 277 bits (679), Expect = 7e-75
Identities = 135/229 (58%), Positives = 167/229 (72%)
Frame = -1
Query: 783 VKQRQKKAHIMXSNLTVYHRGQSEMGQRTSGEXXSLSILCLPKMK*LTALVSPKGKGYKG 604
+++RQKKAH++ + Q R E + + + + +G G+KG
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 132
Query: 603 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIYRIGQG 424
VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N KIYRIG+
Sbjct: 133 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKS 192
Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKS
Sbjct: 193 ALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 249
Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
L TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 250 LITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 277 bits (679), Expect = 7e-75
Identities = 135/229 (58%), Positives = 167/229 (72%)
Frame = -1
Query: 783 VKQRQKKAHIMXSNLTVYHRGQSEMGQRTSGEXXSLSILCLPKMK*LTALVSPKGKGYKG 604
+++RQKKAH++ + Q R E + + + + +G G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIYRIGQG 424
VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N KIYRIG+
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKS 290
Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKS
Sbjct: 291 ALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
L TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 348 LITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 277 bits (679), Expect = 7e-75
Identities = 135/229 (58%), Positives = 167/229 (72%)
Frame = -1
Query: 783 VKQRQKKAHIMXSNLTVYHRGQSEMGQRTSGEXXSLSILCLPKMK*LTALVSPKGKGYKG 604
+++RQKKAH++ + Q R E + + + + +G G+KG
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 132
Query: 603 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIYRIGQG 424
VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N KIYRIG+
Sbjct: 133 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKS 192
Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKS
Sbjct: 193 ALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 249
Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
L TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 250 LITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 277 bits (679), Expect = 7e-75
Identities = 135/229 (58%), Positives = 167/229 (72%)
Frame = -1
Query: 783 VKQRQKKAHIMXSNLTVYHRGQSEMGQRTSGEXXSLSILCLPKMK*LTALVSPKGKGYKG 604
+++RQKKAH++ + Q R E + + + + +G G+KG
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIYRIGQG 424
VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N KIYRIG+
Sbjct: 231 VTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKS 290
Query: 423 IHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKS 244
++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKS
Sbjct: 291 ALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Query: 243 LRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
L TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 348 LITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 276 bits (676), Expect = 2e-74
Identities = 126/176 (71%), Positives = 148/176 (84%)
Frame = -1
Query: 624 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKK 445
+G G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 444 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 265
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 264 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 276 bits (676), Expect = 2e-74
Identities = 126/176 (71%), Positives = 148/176 (84%)
Frame = -1
Query: 624 KGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKK 445
+G G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FT ARAGQKG+HHRT +N K
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 444 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 265
IYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR
Sbjct: 236 IYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 292
Query: 264 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 97
+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 293 LITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 615 GYKGVTSRWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTAARAGQKGYHHRTEMNKKIY 439
G++G RW + P R+T K R++ +G+ +R+ G GY RT +I
Sbjct: 234 GFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIV 293
Query: 438 RI 433
RI
Sbjct: 294 RI 295
>U23175-3|AAC46712.2| 959|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform a protein.
Length = 959
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -2
Query: 608 KVSLLVGTQRSYPVRHTRVLGKLPALELGILLGCRSLQLVLV 483
++ LL+ Q++YP H + K+P ++ + C+ LQL+++
Sbjct: 874 RLLLLITEQQAYPPTH--YIRKVPQRKVHLFTACQLLQLIIL 913
>U23175-2|AAM98009.1| 797|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform b protein.
Length = 797
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -2
Query: 608 KVSLLVGTQRSYPVRHTRVLGKLPALELGILLGCRSLQLVLV 483
++ LL+ Q++YP H + K+P ++ + C+ LQL+++
Sbjct: 712 RLLLLITEQQAYPPTH--YIRKVPQRKVHLFTACQLLQLIIL 751
>U23175-1|AAZ91355.1| 826|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 3, isoform c protein.
Length = 826
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -2
Query: 608 KVSLLVGTQRSYPVRHTRVLGKLPALELGILLGCRSLQLVLV 483
++ LL+ Q++YP H + K+P ++ + C+ LQL+++
Sbjct: 741 RLLLLITEQQAYPPTH--YIRKVPQRKVHLFTACQLLQLIIL 780
>AY887905-1|AAX34417.1| 959|Caenorhabditis elegans anion
transporter ABTS-3 protein.
Length = 959
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -2
Query: 608 KVSLLVGTQRSYPVRHTRVLGKLPALELGILLGCRSLQLVLV 483
++ LL+ Q++YP H + K+P ++ + C+ LQL+++
Sbjct: 874 RLLLLITEQQAYPPTH--YIRKVPQRKVHLFTACQLLQLIIL 913
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,853,416
Number of Sequences: 27780
Number of extensions: 419487
Number of successful extensions: 1041
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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