Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_N10
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.92 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 507 TPHSSNTPSCSDPPARKSCPVA 442
           TPH SNT S    P+  + P+A
Sbjct: 255 TPHGSNTSSLITTPSPSASPLA 276


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -2

Query: 776 NFR-IHWTWSSSRRXWTALT 720
           +FR IH+TW+S+R  +T +T
Sbjct: 59  DFRAIHFTWASARVGYTIVT 78


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -2

Query: 776 NFR-IHWTWSSSRRXWTALT 720
           +FR IH+TW+S+R  +T +T
Sbjct: 59  DFRAIHFTWASARVGYTIVT 78


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -2

Query: 776 NFR-IHWTWSSSRRXWTALT 720
           +FR IH+TW+S+R  +T +T
Sbjct: 59  DFRAIHFTWASARVGYTIVT 78


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 549 WWTPTRPSATSRGATPHSSNTPSCSDPPARKSC 451
           +W+P   +A +     +S+  P  SDP    SC
Sbjct: 107 FWSPAATAAATATEYKYSAAAPGPSDPSV-SSC 138


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/41 (26%), Positives = 16/41 (39%)
 Frame = -1

Query: 540 PTRPSATSRGATPHSSNTPSCSDPPARKSCPVAMTTNLRSD 418
           PT P+    G  P +    S   PPA    P   +  L ++
Sbjct: 51  PTNPAFFHPGLLPLAWQANSPPSPPAPSELPALKSRKLNNN 91


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 528 SATSRGATPHSSNTPSCSDP 469
           SAT+     +SS++PS S P
Sbjct: 26  SATTEAPAAYSSSSPSGSSP 45


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 528 SATSRGATPHSSNTPSCSDP 469
           SAT+     +SS++PS S P
Sbjct: 26  SATTEAPAAYSSSSPSGSSP 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,851
Number of Sequences: 336
Number of extensions: 3804
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)