Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_N10
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 163 1e-40
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 148 6e-36
03_06_0106 - 31682200-31682775 34 0.15
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 32 0.61
02_01_0302 - 2021221-2023305 32 0.61
01_06_0937 + 33175966-33178020 30 2.5
01_06_0658 - 30942890-30943054,30943159-30943266,30943448-309435... 30 2.5
02_04_0332 + 22093387-22093550,22093753-22094056 29 4.3
07_01_0917 + 7735696-7735896,7735907-7736404,7736481-7736813,773... 29 5.7
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 5.7
06_03_0219 - 18227559-18227858,18227864-18228340 28 7.5
06_01_0931 + 7192519-7194075 28 7.5
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 7.5
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 28 7.5
09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659 28 9.9
03_05_0674 + 26619579-26619658,26620020-26620746,26620999-266214... 28 9.9
01_01_0606 - 4503620-4504060 28 9.9
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 163 bits (396), Expect = 1e-40
Identities = 72/114 (63%), Positives = 88/114 (77%)
Frame = -3
Query: 775 TFGSTGRGQVHDXHGLLSLHENFDQQFVPLRLQSSKQLLNVINKNFGTLAFCKRWLERAG 596
TFGSTG+G V + +NFD VPLR+ +KQLL IN NFGTLAFC+R+L+R G
Sbjct: 439 TFGSTGKGFVREDLECSHYMKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRLG 498
Query: 595 ASRYAMALKDLCDKGVVDAYPPLCDIKGCYTAQFEHTILLRPTCKEVVSRGDDY 434
++Y MALK+LCD G+V YPPLCD++G Y +QFEHTILLRPTCKEV+SRGDDY
Sbjct: 499 ETKYLMALKNLCDVGIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 552
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 148 bits (358), Expect = 6e-36
Identities = 66/111 (59%), Positives = 83/111 (74%)
Frame = -3
Query: 775 TFGSTGRGQVHDXHGLLSLHENFDQQFVPLRLQSSKQLLNVINKNFGTLAFCKRWLERAG 596
TFGSTG+G V + +NFD VPLR +KQLL IN NFGTLAFC+R+L+R G
Sbjct: 383 TFGSTGKGYVREDLECSHYMKNFDVGHVPLRAAKAKQLLVTINNNFGTLAFCRRYLDRLG 442
Query: 595 ASRYAMALKDLCDKGVVDAYPPLCDIKGCYTAQFEHTILLRPTCKEVVSRG 443
++Y MALK+LCD G+V+ PP+CD++G Y +Q EHTILLRPTCKEV+SRG
Sbjct: 443 ETKYLMALKNLCDAGIVEPCPPMCDVRGSYVSQSEHTILLRPTCKEVISRG 493
>03_06_0106 - 31682200-31682775
Length = 191
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Frame = -1
Query: 555 RGWWTPTRPSATSRG-ATPHSSNTP-SC-----SDPPARKSCPVAMTTNLR 424
RG P P++TSRG AT HSS P SC S PP R + A+TT R
Sbjct: 100 RGNKGPAPPTSTSRGRATSHSSAPPRSCWTLTASHPPPRSAAGFALTTPFR 150
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = -3
Query: 688 LRLQSSKQLLNVINKNFGTLAFCKRWLERAGASRYAMALKDLCDKGVVDAYPPLCDIKGC 509
L++++S+ + + I++ F + F R LE R + L + + ++ YP L + G
Sbjct: 206 LKMKASRFIFSEISQKFPIMPFTARALEE---KRARLGLVECMNHELLQPYPVLHEKPGD 262
Query: 508 YTAQFEHTILLRPTCKEVVS 449
A + T+LL P+ + V+
Sbjct: 263 LVAHIKFTVLLLPSGSQRVT 282
>02_01_0302 - 2021221-2023305
Length = 694
Score = 31.9 bits (69), Expect = 0.61
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 543 TPTRPSATSRGATPHSSNTPSCSDPPARKSCP 448
TP+ PS +S P SNTPS PP+ + P
Sbjct: 423 TPSYPSPSSSYPAPPGSNTPSYPSPPSSATTP 454
>01_06_0937 + 33175966-33178020
Length = 684
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 595 ASRYAMALKDLCDKGVV-DAYPPLCDI--KGCYTAQFEHTILLRPTCK 461
A Y ++ LCD+G V +A L D+ +GC + +T+LL CK
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192
>01_06_0658 -
30942890-30943054,30943159-30943266,30943448-30943598,
30943683-30943780,30943869-30944020,30944298-30944403,
30944499-30944588,30944668-30944813,30945396-30945695,
30945953-30946038,30947260-30947996
Length = 712
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 610 LERAGASRYAMALKDLCDKGVVDAYPPLCDIKGCYTAQ--FEHTILLRPTCKEVV 452
L+ S Y +LKD D ++D YP C K A+ E +LRP K+ V
Sbjct: 627 LKNCRNSMYMGSLKDCIDPNLMDLYPHDCVYKMAMLAKQCVEEDPVLRPDMKQAV 681
>02_04_0332 + 22093387-22093550,22093753-22094056
Length = 155
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 582 RWR*RTSATRGWWTPTRPSATSRGATPHS--SNTPSCSDPPARKSCPVA 442
RWR RT+ G W P R RG+ P S + P C DPP + P A
Sbjct: 54 RWR-RTAV--GAWLPLR-----RGSLPSSPFAGVPLCRDPPPQLVAPAA 94
>07_01_0917 +
7735696-7735896,7735907-7736404,7736481-7736813,
7736991-7737314,7737367-7737836,7738165-7738447,
7738527-7738640
Length = 740
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -1
Query: 597 GPLVTRWR*RTSATRGWWTPTRPSATSRGATPHSSNTPSCSDPPARKSCPVAMTTNLRSD 418
G L RWR +R W+ R ++++ + H NT S DP S P +LR
Sbjct: 93 GKLSARWRIVGKISRQRWS--RSTSSTPPSQNHLGNTHSSPDPCGMSSMPPNQRKSLRKK 150
Query: 417 *PFERHLIFINTCKS*LGT 361
R L N LGT
Sbjct: 151 SQAYRDLQARNLHPHRLGT 169
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 543 TPTRPSATSRGATPHSSNTPS-CSDPPARKS 454
TP PS+ S TP +TP+ C PPA S
Sbjct: 286 TPPSPSSGSSRTTPGGCSTPTPCGTPPAPSS 316
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 592 RPRRVPASACKTRVYQSSC*SRSEAVSTIAISTEQIADRSFHVVRAVHXRRELDHVQWIR 771
RP R A A +R+ + + AV ++ ++ S V R H RR L VQW R
Sbjct: 122 RPSRFSAPAASSRLSRLARAPSGRAVFSLGLAATSSPSPS--VSRGKHRRRVLAGVQWRR 179
Query: 772 KFKSV 786
SV
Sbjct: 180 HHLSV 184
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 546 WTPTRPSA-TSRGATPHSSNTPSCSDPPARKSCPVAMT 436
W P+ P +S ++P SS T +DPPA CP++ T
Sbjct: 8 WRPSSPPMPSSSSSSPSSSFT---ADPPAEFLCPISGT 42
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = -1
Query: 543 TPTRPSATSRGATPHSSNTPSCSDPPARKSCPVAMTTNLRSD*PFERHL 397
TPT PSA R A P + TPS S P + A++ LR F R L
Sbjct: 169 TPT-PSAPPRAAAPSPAGTPSPSPIPPSSTPVSALSGPLRQVDEFLRGL 216
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 543 TPTRPSATSRGATPHSSNTPSCSDPPARKS 454
TPT + T ++P SS TPS S P+ S
Sbjct: 223 TPTGSTPTQTPSSPSSSGTPSPSSSPSNSS 252
>09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659
Length = 522
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 691 PLRLQSSKQLLNVINKNFGTLAFCKRWLERAGASRYAMALKDLCDKGV 548
P+ +S+Q L V NK+ +C ++ E G R A + D+GV
Sbjct: 369 PVGFLASEQCLTVTNKSASYSTYCAQYCESGGGDRVARERRG-GDRGV 415
>03_05_0674 +
26619579-26619658,26620020-26620746,26620999-26621486,
26621746-26621902,26621975-26621998
Length = 491
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 510 ATPHSSNTPSCSDPPARKSCPVAMTTN 430
A P S N PSC PP R+ + TT+
Sbjct: 398 AAPPSDNYPSCLRPPVRRLITSSSTTS 424
>01_01_0606 - 4503620-4504060
Length = 146
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 543 TPTRPSATSRGATPHSSNTPSCSDPPARKSCPVA 442
TPT SAT R T +S + S PARK VA
Sbjct: 93 TPTPTSATERKGTTAASPRGTQSTTPARKGLAVA 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,996,440
Number of Sequences: 37544
Number of extensions: 399398
Number of successful extensions: 1347
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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