Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M23
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 33 0.93
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 33 0.93
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 33 0.93
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 3.8
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 31 6.6
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 31 6.6
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 31 6.6
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 31 6.6
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 31 6.6
D87742-1|BAA13448.1| 1193|Homo sapiens KIAA0268 protein. 30 8.7
BC047116-1|AAH47116.2| 467|Homo sapiens MIA3 protein protein. 30 8.7
AL592148-11|CAI40473.1| 785|Homo sapiens C219-reactive peptide ... 30 8.7
AL592148-7|CAI40469.1| 1907|Homo sapiens C219-reactive peptide (... 30 8.7
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.93
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -2
Query: 740 WRFXPLCIXPPSPGXLGXINPIXXNPXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPP 561
W F + + PP P + P S+ QPP P P P+ + PG +PP
Sbjct: 37 WMFWAM-LPPPPPPLTSSLPAAGSKPSSES--QPPMEAQSLPGAP-PPFDAQILPGAQPP 92
Query: 560 LSSEAP 543
+++P
Sbjct: 93 FDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.93
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -2
Query: 740 WRFXPLCIXPPSPGXLGXINPIXXNPXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPP 561
W F + + PP P + P S+ QPP P P P+ + PG +PP
Sbjct: 37 WMFWAM-LPPPPPPLTSSLPAAGSKPSSES--QPPMEAQSLPGAP-PPFDAQILPGAQPP 92
Query: 560 LSSEAP 543
+++P
Sbjct: 93 FDAQSP 98
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 33.5 bits (73), Expect = 0.93
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -2
Query: 740 WRFXPLCIXPPSPGXLGXINPIXXNPXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPP 561
W F + + PP P + P S+ QPP P P P+ + PG +PP
Sbjct: 37 WMFWAM-LPPPPPPLTSSLPAAGSKPSSES--QPPMEAQSLPGAP-PPFDAQILPGAQPP 92
Query: 560 LSSEAP 543
+++P
Sbjct: 93 FDAQSP 98
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 644 QPPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
+PP + PFP +P +P FAP L+PP +AP + P L
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 623 PFPSIPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 516
P P P TP E +P PP S P SA+LTPSSL
Sbjct: 209 PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 242
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 623 PFPSIPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 516
P P P TP E +P PP S P SA+LTPSSL
Sbjct: 52 PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 623 PFPSIPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 516
P P P TP E +P PP S P SA+LTPSSL
Sbjct: 348 PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 623 PFPSIPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 516
P P P TP E +P PP S P SA+LTPSSL
Sbjct: 348 PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 623 PFPSIPLTPY*KEFAPGLKPPLSSEAP-SAYLTPSSL 516
P P P TP E +P PP S P SA+LTPSSL
Sbjct: 348 PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381
>D87742-1|BAA13448.1| 1193|Homo sapiens KIAA0268 protein.
Length = 1193
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 713 PPSPGXLGXINPIXXN-PXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL 558
PP PG P+ P PPQ PF PL P F PG++PPL
Sbjct: 1049 PPFPGVPLMSTPMGGPVPPPIRYGPPPQLCGPFGPRPLPP---PFGPGMRPPL 1098
>BC047116-1|AAH47116.2| 467|Homo sapiens MIA3 protein protein.
Length = 467
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 713 PPSPGXLGXINPIXXN-PXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL 558
PP PG P+ P PPQ PF PL P F PG++PPL
Sbjct: 323 PPFPGVPLMSTPMGGPVPPPIRYGPPPQLCGPFGPRPLPP---PFGPGMRPPL 372
>AL592148-11|CAI40473.1| 785|Homo sapiens C219-reactive peptide
(FLJ39207) protein.
Length = 785
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 713 PPSPGXLGXINPIXXN-PXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL 558
PP PG P+ P PPQ PF PL P F PG++PPL
Sbjct: 641 PPFPGVPLMSTPMGGPVPPPIRYGPPPQLCGPFGPRPLPP---PFGPGMRPPL 690
>AL592148-7|CAI40469.1| 1907|Homo sapiens C219-reactive peptide
(FLJ39207) protein.
Length = 1907
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 713 PPSPGXLGXINPIXXN-PXSDXIHQPPQT*HPFPSIPLTPY*KEFAPGLKPPL 558
PP PG P+ P PPQ PF PL P F PG++PPL
Sbjct: 1763 PPFPGVPLMSTPMGGPVPPPIRYGPPPQLCGPFGPRPLPP---PFGPGMRPPL 1812
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,807,235
Number of Sequences: 237096
Number of extensions: 2330538
Number of successful extensions: 5672
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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