Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M23
         (816 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p pro...    29   5.8  
AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-P...    29   5.8  
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    29   5.8  

>AY119125-1|AAM50985.1|  553|Drosophila melanogaster RE28286p
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = -2

Query: 713 PPSPGXLGXINPIXXNPXSDXIHQPPQT*HPF----PSIPLTP-Y*KEFAPGLKPPLSSE 549
           P +P  +    P    P     + PP    P     PSI L P Y    A G  PP+ S+
Sbjct: 435 PETPSEVPPQRPSVQQPWKPVFYSPPTESAPASPNRPSITLLPPYGSAPAEGYLPPVGSQ 494

Query: 548 APSAYLTPSSLGMAKGVSPPYFQVNDESQASHLISR 441
            PSA L+ SS G+  G    + Q+ D ++  H+ ++
Sbjct: 495 -PSA-LSASSAGIG-GQGGIFDQLTD-AELEHIFAQ 526


>AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-PA
           protein.
          Length = 625

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = -2

Query: 713 PPSPGXLGXINPIXXNPXSDXIHQPPQT*HPF----PSIPLTP-Y*KEFAPGLKPPLSSE 549
           P +P  +    P    P     + PP    P     PSI L P Y    A G  PP+ S+
Sbjct: 507 PETPSEVPPQRPSVQQPWKPVFYSPPTESAPASPNRPSITLLPPYGSAPAEGYLPPVGSQ 566

Query: 548 APSAYLTPSSLGMAKGVSPPYFQVNDESQASHLISR 441
            PSA L+ SS G+  G    + Q+ D ++  H+ ++
Sbjct: 567 -PSA-LSASSAGIG-GQGGIFDQLTD-AELEHIFAQ 598


>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
           protein.
          Length = 1118

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
 Frame = -2

Query: 719 IXPPSPGXLGXINPIXXNPXSDXIHQPPQT*HPFPSIPL--TPY*KEFAPG-LKPP-LSS 552
           I PPS G +    P+           PP T  P  SIP   +P      PG  KPP +  
Sbjct: 520 IYPPSTGWIPPFGPLTQGGHPPGSLLPPNTGLPPGSIPPLGSPNQIGHPPGSQKPPNVGI 579

Query: 551 EAPSAYLTPSSLGMAKGVSPP 489
             PS   TP S  + +G  PP
Sbjct: 580 YPPSTGWTPPSGPLTQGGHPP 600


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,525,253
Number of Sequences: 53049
Number of extensions: 702596
Number of successful extensions: 1922
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)