Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M19
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.50 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
 Frame = -3

Query: 295  DW--NSKKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPY 122
            DW  ++K   KK    P+T++    T     RP   T+   T TT+   T+P +      
Sbjct: 1145 DWPKSAKCEEKKPGHKPSTSSWQKPTKPSY-RPPSTTNHWQTKTTTSTTTRPTTTVSQLI 1203

Query: 121  ETRATEPILMWNQQCK*K*SCIN 53
            + +        ++ C     C+N
Sbjct: 1204 DDKCDSGQYYPHESCSSFYVCVN 1226


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 29  YNLFRRHLIYTRLFLFTLLV 88
           Y+++ RH  Y RL+  T LV
Sbjct: 60  YSIYVRHTYYRRLYTITHLV 79


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 29  YNLFRRHLIYTRLFLFTLLV 88
           Y+++ RH  Y RL+  T LV
Sbjct: 60  YSIYVRHTYYRRLYTITHLV 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,326
Number of Sequences: 336
Number of extensions: 2726
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)