Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_T7_M19
(762 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18298| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 32 0.58
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 32 0.58
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 32 0.58
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 31 0.77
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_24331| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.086) 31 0.77
SB_13975| Best HMM Match : SGS (HMM E-Value=3.4) 31 0.77
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_23898| Best HMM Match : Ldl_recept_a (HMM E-Value=1.4013e-45) 31 0.77
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 31 1.0
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 31 1.0
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 3.1
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 4.1
SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_24980| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 29 5.5
SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011) 28 7.2
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_6116| Best HMM Match : Patched (HMM E-Value=0.025) 28 7.2
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 28 7.2
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 28 7.2
SB_55144| Best HMM Match : CMAS (HMM E-Value=0.72) 28 9.5
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 28 9.5
SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0) 28 9.5
SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 9.5
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 9.5
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_18298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -3
Query: 292 WNSKKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETR 113
W S S+ K++ A + + R SP SR TP +SR + +S SP+ +R
Sbjct: 34 WLSDYESEHDKKSEAELFREDSIASFSQRTSPFDSRFTTPLSSRPTSPYSSHFTSPFNSR 93
Query: 112 ATEPILMW 89
T P M+
Sbjct: 94 PTTPSAMY 101
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3
Query: 286 SKKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRAT 107
S K S KT + S + + S TS A+ TSRR + SL SP +R T
Sbjct: 133 SSKTSPKTSPKSSPKTSPKTSSKTSLKTSQKTSLNASRKTSRRTSLKRSLKTSPKTSRKT 192
Query: 106 EP 101
P
Sbjct: 193 SP 194
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 265 TKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRA 110
T APATT + A T+ +P T+ T T + T+ S T++P T A
Sbjct: 334 TTGAPATTGAPATTVAPTTTGAPTTTGAPTTTGAPSTTEAPSTTEAPSTTEA 385
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 317 IHRTWRRRLELEKKIKEDQASPGNYSVMCSNPNR 216
+H RR+ ELEKKI+E + S VM N N+
Sbjct: 593 LHEEKRRKEELEKKIEEMETSKNELLVMLENANK 626
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -2
Query: 527 CPNGTCIRNNTACSANCSAG--GEECGLGSGCPSEQTHFPAEVTSAGLA 387
C +G C+ +N CSAG G+ C + C T +GLA
Sbjct: 780 CVHGACVSSNGVVRCECSAGYLGKSCNMTDPCEPSPCLNGGSCTKSGLA 828
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 284 EKKIKEDQASPGNYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTDETELTYEVPLRDESY* 105
E+ ++D + Y S P L ++ +TR S+D PT E TY+ P+R +S
Sbjct: 539 ERARRDDLINGDRYDRPDSGPQNLARSN--SLTRKTSEDTYPTKRAEHTYDHPIRADSIT 596
Query: 104 TNP 96
P
Sbjct: 597 RKP 599
>SB_24331| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.086)
Length = 444
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 295 DWNSKKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQT 152
DW K KK +++ A S A++ C+ P TSR + + S R T
Sbjct: 270 DWKEKYNKKKCEESVALNGSKASSRVVYCQSPPSTSRSSGASPSVRVT 317
>SB_13975| Best HMM Match : SGS (HMM E-Value=3.4)
Length = 473
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 284 EKKIKEDQASPGNYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTDETELTYEVPLRDESY* 105
E+ ++D + Y S P L ++ +TR S+D PT E TY+ P+R +S
Sbjct: 391 ERARRDDLINGDRYDRPDSGPQNLARSN--SLTRKTSEDTYPTKRAEHTYDHPIRADSIT 448
Query: 104 TNP 96
P
Sbjct: 449 RKP 451
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -3
Query: 298 DDWNSKKRSKKTKQAP---ATTASCAATLTGCCRPSPVTSRGATPTTSRRQT---KPNSL 137
D WN +S + P AT + LT CRP P + G PT R Q+ K + L
Sbjct: 797 DYWNQFLKSDDIRSPPYNPATHRTDGTPLTPECRPVPQSMLGPLPTPGRTQSVKKKGSFL 856
Query: 136 TKSPYETR 113
+++P R
Sbjct: 857 SRTPITPR 864
>SB_23898| Best HMM Match : Ldl_recept_a (HMM E-Value=1.4013e-45)
Length = 291
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -2
Query: 605 RNAMGACENGPVLFGXERASATPDTYCPNGTCIRNNTAC--SANCSAGGEECGLGSGCPS 432
RN + A NG + G + C NG C+ N C S +C G +E G G C S
Sbjct: 80 RNYICARINGVI--GAHKCDVCSQFKCNNGHCVHRNWKCDGSNDCRDGTDEVGCGK-CGS 136
Query: 431 EQ 426
Q
Sbjct: 137 TQ 138
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 265 TKQAPATTASCAATLTGCCRPSPVT--SRGATPTTSRRQTKPNSLTKSPYETRATEP 101
TKQ ++ + T +P+ T ++ PT S + TKP TKS T++T+P
Sbjct: 150 TKQPSSSRPFKSTKPTKSTKPTKSTKATKSTKPTKSTKPTKPTKPTKSTKPTKSTKP 206
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3
Query: 289 NSKKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRA 110
+S + K TK +T + + T +P+ T + PT + TKP TKS T++
Sbjct: 154 SSSRPFKSTKPTKSTKPTKSTKATKSTKPTKST-KPTKPTKPTKSTKP---TKSTKPTKS 209
Query: 109 TEP 101
T+P
Sbjct: 210 TKP 212
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 265 TKQAP-ATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRAT 107
T AP ATT + AT T + T T T + T PN+ T SP T T
Sbjct: 106 TVTAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTSPNATTTT 159
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = -3
Query: 265 TKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRAT 107
T ATT + T T + T T T + T PN+ T +P T T
Sbjct: 114 TTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTSPNATTTTPNTTTTT 166
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -3
Query: 286 SKKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRAT 107
S KRS KT + S +L + SP TS + TSR+ + SL S + T
Sbjct: 149 SPKRSPKTSSKSSPKTSPKTSLKTSSKTSPKTSLNTSRKTSRKTSLKRSLKTSTKTSLKT 208
Query: 106 EP 101
P
Sbjct: 209 NP 210
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 265 TKQAPATTASCAATLTGCCRPSPVTSRGAT-PTTSRRQTKPNSLTKSPYETRATEPI 98
TKQ P TT ATL +P+ AT PT S + T + T+ P TEP+
Sbjct: 280 TKQ-PTTTQQTTATLPSTKQPTTTQQTTATLPTPSTKPTTVSPTTRQP-PPEPTEPL 334
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 256 APATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETR---ATEP 101
AP TT +P+ T + PTT+ +TKP ++ K+ T AT+P
Sbjct: 1411 APPTTVEDKTREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTTATTTVPATKP 1465
>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3296
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -3
Query: 268 KTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRATEP 101
K +Q T+ A T + + +T+ +T TTS ++ +S +P T TEP
Sbjct: 362 KCQQVGENTSVTTAATTTATQSNSMTTTSSTTTTSSLSSEGSSSATTPETTTPTEP 417
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 268 KTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRATE 104
+T AP TTA T+T +P T+ T + T T +P T A E
Sbjct: 644 ETTMAPETTAEIETTMTPETNAAPETTSAPETTAAPETTAAPETTAAPETTAAPE 698
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -2
Query: 539 PDTYCPNG-TCIRNNTACSANCSAG--GEECGLGSGCP 435
P C NG TC+ A S CS G G+ C LG P
Sbjct: 1450 PSNPCYNGGTCVNEEGAYSCQCSDGFTGKHCDLGYHIP 1487
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 548 SATPDTYCPNGTCIRNNTAC-SANCSAGGEECGLGSGCPS 432
S P YC GT NNT C S + GG E CP+
Sbjct: 1469 SCEPGYYCLLGTVNFNNTVCPSGHYCPGGTETSTQYPCPA 1508
>SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -2
Query: 557 ERASATPDTYCPNGTCIRNNTACSANCS-AGGEECGLGSG 441
+R T C G C+ + CS +C G+ C L G
Sbjct: 803 DRDKCTRSDRCTGGLCVGSKFTCSPDCQVCNGDSCSLKPG 842
>SB_24980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 208 RPSPVTSRGATPTTSRRQTKPNSLTKSPYET 116
RP + G TPT+ + + NSL K+P+++
Sbjct: 125 RPHDFSDTGVTPTSLELRAQSNSLLKNPFKS 155
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = -3
Query: 271 KKTKQAPATTASCAATLTGCCRPSPVTSRGAT---PTTSRRQTKPNSLTKSPYETR--AT 107
K T + P TT T P P T T PTT +TKP T+ P T T
Sbjct: 1088 KPTTEPPRTTPE-PTTEPPRTTPEPTTEPSRTKPEPTTEPSRTKPEPTTEPPRTTSEPTT 1146
Query: 106 EPI 98
EP+
Sbjct: 1147 EPL 1149
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 223 LTGCCRPS--PVTSRGATPTTSRRQTKPNSLTKSPYETRATEP 101
L C RP+ PVT+ +T +++ + T ++ T +P T T P
Sbjct: 617 LVDCSRPTTPPVTTTKSTTSSTTKGTTASTTTSTPTTTPTTRP 659
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 265 TKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRA 110
T APATT + +P T+ T TT+ T + T +P T A
Sbjct: 8 TNTAPATTTAPTTATAPTTTTAPTTNTALTTTTAPTTTTAPTTTTAPTTTTA 59
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 265 TKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRA 110
T APAT + A T +P T+ T T+ T + T +P T A
Sbjct: 2 TTTAPATNTAPATTTAPTTATAPTTTTAPTTNTALTTTTAPTTTTAPTTTTA 53
>SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011)
Length = 734
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 283 KKRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETR 113
K S+ A + ASCA + G SP+ SR ++P S ++ NS +P+E +
Sbjct: 486 KVPSRPGSSAVSLLASCATSQPGSRTVSPLVSRASSPVLS-AHSQWNSDIITPHENQ 541
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/49 (18%), Positives = 25/49 (51%)
Frame = +3
Query: 75 LHCWFHIRIGSVALVS*GDFVSEFGFVCRREVVGVAPRDVTGLGLQQPV 221
+HC+ + +A ++ G ++ G++C+ ++ D G L++ +
Sbjct: 299 IHCFTGTKAEMIAYIAMGFYIGITGYICKANLISPPYLDTAGKNLREAI 347
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -3
Query: 274 SKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRATEP 101
+K T Q T T +PSP T PT QT P T SP T P
Sbjct: 16 TKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPT----QTTPTPTTPSPTAPTQTTP 69
>SB_6116| Best HMM Match : Patched (HMM E-Value=0.025)
Length = 831
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 548 SATPDTYCPNGTCIRN-NTACSANCSA 471
S T DTYC N C R+ N+AC+ + S+
Sbjct: 433 SGTRDTYCRNKRCRRDKNSACATSNSS 459
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 199 PVTSRGATPTTSRRQTKPNSLTKSPYETRATEP 101
P +R +TPTT T ++ T PY RA+ P
Sbjct: 200 PYIARASTPTTHPHITHASTPTTHPYIARASTP 232
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = -3
Query: 280 KRSKKTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSR-----RQTKPNSLTKSPYET 116
K S+KTK + T S G R S T TSR R+TK +S TK+ +T
Sbjct: 47 KPSRKTKTSRKTKTSLKTKTKGKTRTSSKTKTSHKTKTSRNTKTSRKTKTSSNTKTSLKT 106
Query: 115 RAT 107
+ +
Sbjct: 107 KTS 109
>SB_55144| Best HMM Match : CMAS (HMM E-Value=0.72)
Length = 529
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2
Query: 284 EKKIKEDQASPGNYSVMCSNPNRLLQTQPGDVTRGYSDDLPPTDET 147
+ K+ DQ P + S C N L ++ D TRG +DDL T+ T
Sbjct: 191 QSKLVHDQTRPRSRS--CGALNVLGTSRDPDSTRGSNDDLSLTNST 234
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -2
Query: 536 DTYCPNGTCIRNNTACSANCSAGGEECGLGSGCPSEQTHFPAEVTSAGLAGLQISW 369
D C NGT IR T GG C + P+ QT P + + G +W
Sbjct: 690 DKSCGNGTRIRTRTCTRPRPQFGGRNCSMQG--PNAQT-IPCYLRPCPIDGQYSNW 742
>SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0)
Length = 890
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 68 FLFTLLVPHQDWFSSSRLVGGLRK 139
FL LL PH+ F R GG+RK
Sbjct: 110 FLSILLTPHEHQFQKQRSGGGIRK 133
>SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 530 YCPNGTCIRNNTACSANCSAGGEECGLGSG 441
+ NG C +N ANC+ CG G G
Sbjct: 46 WATNGECSKNPDWMKANCAKSCNSCGGGGG 75
>SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 530 YCPNGTCIRNNTACSANCSAGGEECG-LGSGC 438
Y GTC + C C G+ CG G GC
Sbjct: 244 YAGCGTCGKGWGTCGKGCRTSGKGCGTCGKGC 275
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -3
Query: 274 SKKTKQAP--ATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRATEP 101
+K T P TT + T T +P T TP + TKP + T P T T+P
Sbjct: 62 TKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTT-TTPPATTTPTKP 120
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -3
Query: 268 KTKQAPATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRATE 104
+T P TT++ + T+ +PVT+ TTS T T P T A++
Sbjct: 453 ETTMVPETTSAPSTTMAPETTATPVTTMAPDTTTSPATTAALETTMVPETTAASD 507
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 256 APATTASCAATLTGCCRPSPVTSRGATPTTSRRQTKPNSLTKSPYETRATEPILMWN 86
AP TT + AT +PV + N + Y TR +P W+
Sbjct: 778 APETTTASLATTASLATTAPVGRYSTRGIIDTNDIRSNYNSNGNYSTRCEQPFSSWS 834
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,315,542
Number of Sequences: 59808
Number of extensions: 379850
Number of successful extensions: 1550
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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