Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M19
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.3  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.1  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   5.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   9.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   9.4  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 503 NNTACSANCSAGGEECGLGS--GCPSEQTHF 417
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 503 NNTACSANCSAGGEECG 453
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +3

Query: 102 GSVALVS*GDFVSEFGFVCRREVVGVAPRDVTGLGLQQ 215
           G+  ++   D+     ++C+   +G   RD++ L +Q+
Sbjct: 456 GTKLIIKNVDYADTGAYMCQASSIGGITRDISSLVVQE 493


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 503 NNTACSANCSAGGEECG 453
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 194 DVTRGYSDDLPPTDETE 144
           +++ G +DD+PP  E E
Sbjct: 307 ELSTGMNDDIPPETEEE 323


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 289  NSKKRSKKTKQAPATTASCAAT 224
            + K+   KTK+    TA+ AAT
Sbjct: 1092 DQKQSDDKTKETSTVTAAAAAT 1113


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 167 LPPTDETELTYEVPLRD 117
           LPPT  T+    +PL+D
Sbjct: 179 LPPTRPTDKALRLPLQD 195


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 167 LPPTDETELTYEVPLRD 117
           LPPT  T+    +PL+D
Sbjct: 236 LPPTRPTDKALRLPLQD 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,625
Number of Sequences: 438
Number of extensions: 3078
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)