Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M17
         (886 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55943 Cluster: PREDICTED: similar to Pleckstrin...    36   1.4  
UniRef50_A4S5W9 Cluster: Predicted protein; n=2; Ostreococcus|Re...    35   2.4  
UniRef50_Q3Y0Z4 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  

>UniRef50_UPI0000D55943 Cluster: PREDICTED: similar to Pleckstrin
           homology domain-containing family G member 1; n=1;
           Tribolium castaneum|Rep: PREDICTED: similar to
           Pleckstrin homology domain-containing family G member 1
           - Tribolium castaneum
          Length = 1421

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
 Frame = +3

Query: 21  ESPGAGLSLNRSQHDAALPSTTPRQE---RKSSTDYSEPR--HRTELYPDLRSRDARVKK 185
           +SP  G   N S     + +  P QE   R +S +   PR  +RT +Y  LRS +  + +
Sbjct: 347 KSPQVGNFANLSPCVQKILANVPDQELSKRFNSEETLGPRRGNRTSIYRSLRSPEKHLNR 406

Query: 186 KTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 305
             +S+D+  PN +++ +S F     ++ S     P   GS
Sbjct: 407 SNESLDIISPN-VQKMISNFPDAELVLPSSERSKPSRNGS 445


>UniRef50_A4S5W9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 689

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 27/85 (31%), Positives = 37/85 (43%)
 Frame = -1

Query: 316 MLTEEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSV 137
           +L   PRE   ++      R + S+RE RRR P G+R S  ++F     +  R    +S 
Sbjct: 45  LLCFAPRERPEARATRRERRGARSEREARRRKPRGARSSSRALFL---QANFRFLVADSA 101

Query: 136 RCRGSE*SVDDFRSWRGVVLGRAAS 62
             R S    D   SW  VV    AS
Sbjct: 102 DLRASSRDADRMASWEDVVRVDVAS 126


>UniRef50_Q3Y0Z4 Cluster: Putative uncharacterized protein; n=1;
           Enterococcus faecium DO|Rep: Putative uncharacterized
           protein - Enterococcus faecium DO
          Length = 790

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 27/76 (35%), Positives = 34/76 (44%)
 Frame = +3

Query: 72  LPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFEC 251
           LP T P Q R  S   SE   R     DL  R+  V+   DSIDL + NG+     +   
Sbjct: 608 LPKTDPEQYRYKSNINSENEKRIS---DLPKRNQEVQTDDDSIDLPNDNGVEVGTEK-ST 663

Query: 252 ETRLVKSHCLEPPDSR 299
           +  L K+  L   DSR
Sbjct: 664 KIGLPKAQNLPMKDSR 679


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,407,668
Number of Sequences: 1657284
Number of extensions: 8873636
Number of successful extensions: 26179
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26113
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)