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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M17
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    33   0.40 
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373...    32   0.53 
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960...    31   1.2  
08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164...    29   5.0  
07_03_0846 - 21983581-21986055                                         29   6.6  
01_06_0695 - 31292622-31293317                                         28   8.7  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 75  PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 203
           PS TP  ER  S+D   PR     Y   R+RD    K+  S D
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407


>06_03_1055 -
           27234824-27234838,27236087-27236125,27236322-27237388,
           27237422-27237630,27237650-27238053
          Length = 577

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 343 ASVAESGKDMLTEEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 209
           A+ A +GK +   E  E   S+QCD T  + +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473


>03_05_0951 +
           29093962-29094373,29095291-29095388,29095689-29096087,
           29096999-29097724,29097802-29097968,29098046-29098311,
           29098396-29098581,29099072-29099346,29099435-29099683
          Length = 925

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -1

Query: 352 KAEASVAESGKDMLTEEP-RESGGSKQCDFTSRVSHSKRETR-RRSPFGSRRSMLSVFFL 179
           K+ AS A  G D   E P R  GG K+    S  + SKR  + R + F     +L    L
Sbjct: 4   KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPL 63

Query: 178 TRASR 164
           TRA+R
Sbjct: 64  TRAAR 68


>08_02_1081 +
           24215323-24215335,24215450-24215572,24216241-24216489,
           24218517-24218720,24218864-24218993,24219610-24219679,
           24219766-24219900,24219996-24220209,24220314-24220455,
           24220630-24220851,24220997-24221195
          Length = 566

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 24/82 (29%), Positives = 31/82 (37%)
 Frame = -1

Query: 439 FQXXXXRXXGEGGTXEXXYHPAGXCLNAXKAEASVAESGKDMLTEEPRESGGSKQCDFTS 260
           F     R  G  G  +   H A   +++   E +V   GK         S G+ Q   T 
Sbjct: 166 FMDAGSRSSGGAGFDDDDGHAARREVSSSLKELTVRVEGKGGSCSG---SAGTDQMPNTP 222

Query: 259 RVSHSKRETRRRSPFGSRRSML 194
           R  HS  E RRRS    R  +L
Sbjct: 223 RSKHSATEQRRRSKINDRFQLL 244


>07_03_0846 - 21983581-21986055
          Length = 824

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +3

Query: 201 DLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSSVSISLPDSATLASA 350
           DL+D  G  +R    +C+T    S     PD   S VS+ LPD+A  A A
Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +3

Query: 27  PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 161
           P     L   Q D   PS++      SST  S P HR  L P  R
Sbjct: 3   PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,421
Number of Sequences: 37544
Number of extensions: 285943
Number of successful extensions: 920
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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