BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M17 (886 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 33 0.40 06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 32 0.53 03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 31 1.2 08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164... 29 5.0 07_03_0846 - 21983581-21986055 29 6.6 01_06_0695 - 31292622-31293317 28 8.7 >02_04_0232 + 21130122-21130454,21130895-21131053,21131424-21131582, 21132420-21132512,21133321-21133437,21133623-21133697, 21133878-21134104,21134200-21135073 Length = 678 Score = 32.7 bits (71), Expect = 0.40 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +3 Query: 75 PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 203 PS TP ER S+D PR Y R+RD K+ S D Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407 >06_03_1055 - 27234824-27234838,27236087-27236125,27236322-27237388, 27237422-27237630,27237650-27238053 Length = 577 Score = 32.3 bits (70), Expect = 0.53 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -1 Query: 343 ASVAESGKDMLTEEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 209 A+ A +GK + E E S+QCD T + +S RE ++R+P+ + Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473 >03_05_0951 + 29093962-29094373,29095291-29095388,29095689-29096087, 29096999-29097724,29097802-29097968,29098046-29098311, 29098396-29098581,29099072-29099346,29099435-29099683 Length = 925 Score = 31.1 bits (67), Expect = 1.2 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -1 Query: 352 KAEASVAESGKDMLTEEP-RESGGSKQCDFTSRVSHSKRETR-RRSPFGSRRSMLSVFFL 179 K+ AS A G D E P R GG K+ S + SKR + R + F +L L Sbjct: 4 KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPL 63 Query: 178 TRASR 164 TRA+R Sbjct: 64 TRAAR 68 >08_02_1081 + 24215323-24215335,24215450-24215572,24216241-24216489, 24218517-24218720,24218864-24218993,24219610-24219679, 24219766-24219900,24219996-24220209,24220314-24220455, 24220630-24220851,24220997-24221195 Length = 566 Score = 29.1 bits (62), Expect = 5.0 Identities = 24/82 (29%), Positives = 31/82 (37%) Frame = -1 Query: 439 FQXXXXRXXGEGGTXEXXYHPAGXCLNAXKAEASVAESGKDMLTEEPRESGGSKQCDFTS 260 F R G G + H A +++ E +V GK S G+ Q T Sbjct: 166 FMDAGSRSSGGAGFDDDDGHAARREVSSSLKELTVRVEGKGGSCSG---SAGTDQMPNTP 222 Query: 259 RVSHSKRETRRRSPFGSRRSML 194 R HS E RRRS R +L Sbjct: 223 RSKHSATEQRRRSKINDRFQLL 244 >07_03_0846 - 21983581-21986055 Length = 824 Score = 28.7 bits (61), Expect = 6.6 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = +3 Query: 201 DLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSSVSISLPDSATLASA 350 DL+D G +R +C+T S PD S VS+ LPD+A A A Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373 >01_06_0695 - 31292622-31293317 Length = 231 Score = 28.3 bits (60), Expect = 8.7 Identities = 16/45 (35%), Positives = 18/45 (40%) Frame = +3 Query: 27 PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 161 P L Q D PS++ SST S P HR L P R Sbjct: 3 PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,525,421 Number of Sequences: 37544 Number of extensions: 285943 Number of successful extensions: 920 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 917 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2503236492 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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