BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M16 (859 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 30 4.7 AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 30 4.7 AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 30 4.7 AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 29 6.2 AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 6.2 AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 6.2 AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 6.2 >AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p protein. Length = 1458 Score = 29.9 bits (64), Expect = 4.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311 H PHH H H+G+G Q E+L+++ Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690 >AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA, isoform A protein. Length = 1458 Score = 29.9 bits (64), Expect = 4.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311 H PHH H H+G+G Q E+L+++ Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690 >AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB, isoform B protein. Length = 1740 Score = 29.9 bits (64), Expect = 4.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311 H PHH H H+G+G Q E+L+++ Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972 >AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain protein SMRTER protein. Length = 3469 Score = 29.5 bits (63), Expect = 6.2 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -2 Query: 690 VQVXSQDRGXGGSSAGQCSKMXFPETGPP 604 V S G GG S GQ + PETGPP Sbjct: 2795 VVTGSGGAGGGGPSPGQFLRASVPETGPP 2823 >AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC, isoform C protein. Length = 3604 Score = 29.5 bits (63), Expect = 6.2 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -2 Query: 690 VQVXSQDRGXGGSSAGQCSKMXFPETGPP 604 V S G GG S GQ + PETGPP Sbjct: 2930 VVTGSGGAGGGGPSPGQFLRASVPETGPP 2958 >AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB, isoform B protein. Length = 3604 Score = 29.5 bits (63), Expect = 6.2 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -2 Query: 690 VQVXSQDRGXGGSSAGQCSKMXFPETGPP 604 V S G GG S GQ + PETGPP Sbjct: 2930 VVTGSGGAGGGGPSPGQFLRASVPETGPP 2958 >AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA, isoform A protein. Length = 3604 Score = 29.5 bits (63), Expect = 6.2 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -2 Query: 690 VQVXSQDRGXGGSSAGQCSKMXFPETGPP 604 V S G GG S GQ + PETGPP Sbjct: 2930 VVTGSGGAGGGGPSPGQFLRASVPETGPP 2958 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,294,390 Number of Sequences: 53049 Number of extensions: 369438 Number of successful extensions: 902 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 902 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 4126982652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -