Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M14
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.95 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.95 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.95 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.8  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 607 KTRGEGGSSRGNVPDVFPGDAPR 539
           KT+GEGGS  G   D+ P  +P+
Sbjct: 302 KTKGEGGSEGGG-DDISPQGSPQ 323


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 586 SSRGNVPDVFPGDAPRHT 533
           SS  + P VFP DAP H+
Sbjct: 182 SSSSSPPGVFPVDAPMHS 199


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 607 KTRGEGGSSRGNVPDVFPGDAPR 539
           KT+GEGGS  G   D+ P  +P+
Sbjct: 304 KTKGEGGSEGGG-DDISPQGSPQ 325


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 276 LPEWSCEQSAWWGACGR 226
           L +++CE   WW  C R
Sbjct: 50  LKQYTCELKLWWEFCQR 66


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -1

Query: 273  PEWSCEQSAWWGA 235
            P+W+ + S WW +
Sbjct: 1033 PDWTTKPSTWWSS 1045


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 565 LEHCHASFHLRHG 603
           L HCH  FH+  G
Sbjct: 601 LFHCHIEFHVEVG 613


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 677 ILXVNHEIHFRHLLCXPK 730
           +L +  E HF   LC P+
Sbjct: 16  LLELEKEFHFNKYLCRPR 33


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 677 ILXVNHEIHFRHLLCXPK 730
           +L +  E HF   LC P+
Sbjct: 147 LLELEKEFHFNKYLCRPR 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,867
Number of Sequences: 336
Number of extensions: 1765
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)