BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M14 (813 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0749 + 35975653-35976453 31 1.4 03_02_0892 - 12218803-12218864,12219395-12219740 30 1.9 01_01_0680 + 5217633-5219072 29 3.3 08_01_0569 - 5066760-5067179 29 4.4 01_05_0466 - 22488026-22488427 29 4.4 04_03_0965 - 21296608-21297165,21297332-21297682,21297781-212979... 29 5.8 >03_06_0749 + 35975653-35976453 Length = 266 Score = 30.7 bits (66), Expect = 1.4 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 543 GASPGKTSGTLPRELPPSPRVLALXP 620 GA+ G G +P E PSPR+L L P Sbjct: 46 GATNGPWDGVVPPECAPSPRILRLSP 71 >03_02_0892 - 12218803-12218864,12219395-12219740 Length = 135 Score = 30.3 bits (65), Expect = 1.9 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 613 RAKTRGEGGSSRGNVPDVFPGDAPRHTRWR 524 RA+ G+GGS G V D P P + +WR Sbjct: 83 RARDSGDGGSGAGIVHDYRPAVLPFYEKWR 112 >01_01_0680 + 5217633-5219072 Length = 479 Score = 29.5 bits (63), Expect = 3.3 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -2 Query: 371 PRVSRVQAAAARHPRRSGASSPTSLILVTSL 279 PR + A AA PRRS ASS L+L +L Sbjct: 25 PRTTTTTAGAAPAPRRSSASSRLHLLLTAAL 55 >08_01_0569 - 5066760-5067179 Length = 139 Score = 29.1 bits (62), Expect = 4.4 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -2 Query: 395 RLGEAGSAPRVSRVQAAAARHPRRSGASSPTSLILVTSL 279 RLG A +A V+ ++ A R RR+G+S +L+ +L Sbjct: 29 RLGMASAAVAVAALEGAQGRRRRRAGSSGAGGAVLLPAL 67 >01_05_0466 - 22488026-22488427 Length = 133 Score = 29.1 bits (62), Expect = 4.4 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +3 Query: 486 EQKQEHHGEHGAGRQRVCRGASPGKTSGT---LPRELPPSP 599 EQ ++ EH A +R+ GA+ G +PR LPPSP Sbjct: 57 EQVEKASAEHAAEMERLNLGAAALHAGGAPEVVPRPLPPSP 97 >04_03_0965 - 21296608-21297165,21297332-21297682,21297781-21297965, 21298076-21298172,21298859-21299071,21299206-21299334, 21299442-21299567,21301280-21301999 Length = 792 Score = 28.7 bits (61), Expect = 5.8 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -2 Query: 434 AFISILWQMSVSSRLGEAGSAPR---VSRVQAAAARHPRRSGA 315 A + ++W + +R+GE G P VSR ++ H ++GA Sbjct: 279 AIVKVIWDNNSKNRIGEEGGFPHLIYVSREKSPGHHHHYKAGA 321 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,513,661 Number of Sequences: 37544 Number of extensions: 249812 Number of successful extensions: 1134 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1134 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2221181676 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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