BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_T7_M14 (813 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-84|AAF47376.2| 565|Drosophila melanogaster CG32343-PA ... 33 0.61 BT010035-1|AAQ22504.1| 1596|Drosophila melanogaster LD47819p pro... 31 1.9 AE014298-2938|AAN09519.1| 1596|Drosophila melanogaster CG12701-P... 31 1.9 AE014298-2937|AAF49020.1| 1596|Drosophila melanogaster CG12701-P... 31 1.9 AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 30 4.3 AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 30 4.3 AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 30 4.3 >AE014296-84|AAF47376.2| 565|Drosophila melanogaster CG32343-PA protein. Length = 565 Score = 32.7 bits (71), Expect = 0.61 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +3 Query: 516 GAGRQRVCRGASPGKTSGTLPRELPPSPRVLALXPHXDRIRQ 641 G+G+ V GA+PGKT ++ P SP V+ L + RQ Sbjct: 473 GSGQGAVNNGAAPGKTIVNATKQSPKSPNVMPLLTSSEICRQ 514 >BT010035-1|AAQ22504.1| 1596|Drosophila melanogaster LD47819p protein. Length = 1596 Score = 31.1 bits (67), Expect = 1.9 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = -2 Query: 407 SVSSRLGEAGSAPRVSRVQAAAARHPRRSGASSPTS 300 + SS EAGSAP A A PR +SSPTS Sbjct: 216 TASSAQEEAGSAPSAVSTTTAVAMSPRVVSSSSPTS 251 >AE014298-2938|AAN09519.1| 1596|Drosophila melanogaster CG12701-PB, isoform B protein. Length = 1596 Score = 31.1 bits (67), Expect = 1.9 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = -2 Query: 407 SVSSRLGEAGSAPRVSRVQAAAARHPRRSGASSPTS 300 + SS EAGSAP A A PR +SSPTS Sbjct: 216 TASSAQEEAGSAPSAVSTTTAVAMSPRVVSSSSPTS 251 >AE014298-2937|AAF49020.1| 1596|Drosophila melanogaster CG12701-PA, isoform A protein. Length = 1596 Score = 31.1 bits (67), Expect = 1.9 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = -2 Query: 407 SVSSRLGEAGSAPRVSRVQAAAARHPRRSGASSPTS 300 + SS EAGSAP A A PR +SSPTS Sbjct: 216 TASSAQEEAGSAPSAVSTTTAVAMSPRVVSSSSPTS 251 >AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p protein. Length = 1458 Score = 29.9 bits (64), Expect = 4.3 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 233 HAPHHALCSHDHSGSGVRSQVLERLEMR 316 H PHH H H+G+G Q E+L+++ Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690 >AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA, isoform A protein. Length = 1458 Score = 29.9 bits (64), Expect = 4.3 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 233 HAPHHALCSHDHSGSGVRSQVLERLEMR 316 H PHH H H+G+G Q E+L+++ Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690 >AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB, isoform B protein. Length = 1740 Score = 29.9 bits (64), Expect = 4.3 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 233 HAPHHALCSHDHSGSGVRSQVLERLEMR 316 H PHH H H+G+G Q E+L+++ Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,358,456 Number of Sequences: 53049 Number of extensions: 373646 Number of successful extensions: 1211 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1210 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 3818998872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -