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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_T7_M13
         (778 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary...   212   1e-53
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi...   202   8e-51
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr...   144   2e-33
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;...   142   9e-33
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella...   108   2e-22
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n...    99   1e-19
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ...    97   6e-19
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc...    89   2e-16
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso...    85   2e-15
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc...    71   2e-11
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc...    71   3e-11
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N...    62   1e-08
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m...    60   8e-08
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop...    59   1e-07
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ...    58   2e-07
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar...    58   2e-07
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo...    57   4e-07
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc...    57   6e-07
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m...    56   1e-06
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc...    56   1e-06
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha...    53   7e-06
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop...    51   3e-05
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi...    50   5e-05
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop...    48   3e-04
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ...    47   6e-04
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ...    43   0.007
UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-...    36   1.5  
UniRef50_Q8IKJ3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q4Y6V0 Cluster: Putative uncharacterized protein; n=11;...    33   8.0  

>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
           Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
           (Human)
          Length = 403

 Score =  212 bits (517), Expect = 1e-53
 Identities = 98/150 (65%), Positives = 114/150 (76%)
 Frame = -3

Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
           HTQM  +    KK H+  I  N GT  +K+ WARE  E+ +PV+ VF QDEM D I    
Sbjct: 165 HTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 224

Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
                  TSRWHTKKLPRKTH+GLRKVACIGAWHP+RV+F+VARAGQKGYHHRTE+NKKI
Sbjct: 225 GKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKI 284

Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
           Y+IGQG   KDGK+IKNNAST+YDLS+KSI
Sbjct: 285 YKIGQGYLIKDGKLIKNNASTDYDLSDKSI 314



 Score =  106 bits (255), Expect = 5e-22
 Identities = 50/67 (74%), Positives = 57/67 (85%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           KGC +G KKR++TLRKSL V TKR ALEKI+LKFIDT+SKFGHGRFQT  +K AFMG LK
Sbjct: 334 KGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

Query: 114 KDRIREE 94
           KDRI +E
Sbjct: 394 KDRIAKE 400


>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
           Bilateria|Rep: 60S ribosomal protein L3-like - Homo
           sapiens (Human)
          Length = 407

 Score =  202 bits (493), Expect = 8e-51
 Identities = 93/150 (62%), Positives = 110/150 (73%)
 Frame = -3

Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
           HTQM  +    KK HI  I  N GT  +KV WA+   EK +PV SVF+Q E+ D I    
Sbjct: 165 HTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTK 224

Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
                  TSRWHTKKLPRKTHKGLRKVACIGAWHP+RV  ++ARAGQKGYHHRTE+NKKI
Sbjct: 225 GRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKI 284

Query: 407 YRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
           +RIG+G H +DGK++KNNAST YD++ KSI
Sbjct: 285 FRIGRGPHMEDGKLVKNNASTSYDVTAKSI 314



 Score = 91.9 bits (218), Expect = 2e-17
 Identities = 44/66 (66%), Positives = 49/66 (74%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           KGC  G KKR+ITLRKSL VH  R A+E I LKFIDT+SKFGHGRFQT  +K AFMG  K
Sbjct: 334 KGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393

Query: 114 KDRIRE 97
           K   +E
Sbjct: 394 KHLEKE 399


>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
           Trypanosomatidae|Rep: Ribosomal protein L3, putative -
           Trypanosoma brucei
          Length = 480

 Score =  144 bits (350), Expect = 2e-33
 Identities = 72/153 (47%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
 Frame = -3

Query: 767 HTQMXXVKQXX---KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIX 597
           HTQ+  ++      KK H+  I  N GT   K+  A+   EK + +DSVF Q E  D   
Sbjct: 216 HTQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCA 275

Query: 596 XXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMN 417
                       RW    LPRKTH+GLRKVACIGAWHPSRV +TVARAGQ GYHHRT +N
Sbjct: 276 VTKGHGFTGVVKRWGVACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLN 335

Query: 416 KKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
           KKIY++G+ +  +      N A+T YDL+ K+I
Sbjct: 336 KKIYQLGRAVSME-----PNQATTAYDLTAKTI 363



 Score = 86.6 bits (205), Expect = 6e-16
 Identities = 40/67 (59%), Positives = 48/67 (71%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           KG   GP++R+ITLR+ +   T R   EKI LKFIDTSSK GHGRFQT  +K+ + G LK
Sbjct: 383 KGSVAGPRRRVITLRRPMAPQTSRKLTEKITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 442

Query: 114 KDRIREE 94
           KDRIR E
Sbjct: 443 KDRIRRE 449


>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein rpl-3 - Caenorhabditis elegans
          Length = 353

 Score =  142 bits (344), Expect = 9e-33
 Identities = 68/105 (64%), Positives = 79/105 (75%)
 Frame = -3

Query: 632 VFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 453
           V A  +M D I           TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221

Query: 452 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
           GQKG+HHRT +N KIYRIG+    ++G   KNN STE+DL++K+I
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTI 263



 Score = 96.3 bits (229), Expect = 8e-19
 Identities = 46/66 (69%), Positives = 53/66 (80%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           +G  +GPKKR+ITLRKSL   TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342

Query: 114 KDRIRE 97
           +D + E
Sbjct: 343 RDFLAE 348


>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
           natans|Rep: Ribosomal protein L3 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 370

 Score =  108 bits (259), Expect = 2e-22
 Identities = 51/113 (45%), Positives = 71/113 (62%)
 Frame = -3

Query: 734 KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRW 555
           KK +        G+ + K+ +  +   K I ++S+F ++++ D I            SRW
Sbjct: 158 KKKYFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRW 217

Query: 554 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 396
              +LPRKTH+GLRKVACIG W PSRV++T++RAGQKGYH RT  NKKIY+IG
Sbjct: 218 GITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIG 270



 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 127
           KG   G  KR I LRK+++        EKI LK++DTSSK GHGR+++ ADK + M
Sbjct: 310 KGSMTGSSKRPILLRKNIKNKISSVITEKIILKYVDTSSKRGHGRYESSADKFSKM 365


>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
           Rattus norvegicus
          Length = 380

 Score = 98.7 bits (235), Expect = 1e-19
 Identities = 52/102 (50%), Positives = 66/102 (64%)
 Frame = -3

Query: 623 QDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 444
           QDE+ D I           T     +  P +  +G  K+ C+GAWHP+RV+F+VA+ GQK
Sbjct: 193 QDEIIDVIKETKGNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHPARVTFSVAQVGQK 251

Query: 443 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSI 318
           GYHH  + NKKI +IGQG   KDGK+IKNNA TEY LS+KSI
Sbjct: 252 GYHHNGD-NKKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSI 292



 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 33/67 (49%), Positives = 42/67 (62%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           KGC +  KK + T+ K L V T + AL+KI+ K  DT+ K GHG FQT   K AF+G LK
Sbjct: 312 KGCAVRTKKHL-TICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLK 370

Query: 114 KDRIREE 94
           K+   EE
Sbjct: 371 KECTAEE 377


>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
           RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
           60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
           B) (TARBP-B). - Bos Taurus
          Length = 340

 Score = 96.7 bits (230), Expect = 6e-19
 Identities = 59/145 (40%), Positives = 79/145 (54%)
 Frame = -3

Query: 764 TQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXX 585
           TQM  +    KK H+     N G    K+ WA +  E+ +PV+ +F    +   I     
Sbjct: 123 TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKG 180

Query: 584 XXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 405
                 +S W+TKK+P KTH+   + ACI  W       +VA A QKG HH T +NKKIY
Sbjct: 181 KHYKGISSHWYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKKIY 233

Query: 404 RIGQGIHKKDGKVIKNNASTEYDLS 330
           +IGQG   K+GK+IKNNAST+Y  S
Sbjct: 234 KIGQGYLIKNGKIIKNNASTDYTKS 258



 Score = 81.0 bits (191), Expect = 3e-14
 Identities = 36/62 (58%), Positives = 46/62 (74%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
           K C +G KKR+++L KSL + TK+  L+K+N KFIDT+SKFGHG FQ   +K  FMG LK
Sbjct: 279 KDCLVGTKKRVLSLCKSLLMRTKQQTLQKVNFKFIDTTSKFGHGCFQIVGEKKGFMGPLK 338

Query: 114 KD 109
           KD
Sbjct: 339 KD 340


>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
           Thermococcaceae|Rep: 50S ribosomal protein L3P -
           Pyrococcus furiosus
          Length = 365

 Score = 88.6 bits (210), Expect = 2e-16
 Identities = 51/147 (34%), Positives = 74/147 (50%)
 Frame = -3

Query: 764 TQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXX 585
           TQ   +K   KK  +        + E+K  + +E   K + V  V  + E+ D I     
Sbjct: 169 TQPWVIK-LKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKG 227

Query: 584 XXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 405
                   RW  K    K  KG RKV  IG WHP+RV +TV  AGQ G+HHRTE+NK++ 
Sbjct: 228 KGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLI 287

Query: 404 RIGQGIHKKDGKVIKNNASTEYDLSEK 324
            IG+     +GK +K + +TE +++ K
Sbjct: 288 AIGE-----NGK-LKLDENTEIEITPK 308


>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
           protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
           similar to 60S ribosomal protein L3 (L4) - Macaca
           mulatta
          Length = 153

 Score = 85.0 bits (201), Expect = 2e-15
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = -2

Query: 282 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRI 103
           +G KK+++TL KS  V TK  ALEKI+LKFIDT+SKFGHGRFQT  +K AFMG LKKD+ 
Sbjct: 88  VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLKKDQT 147

Query: 102 REE 94
            +E
Sbjct: 148 AKE 150


>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Methanococcus jannaschii
          Length = 335

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
 Frame = -3

Query: 767 HTQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
           HT         KK  I  I       E+++ +A+E   K + +  VF + E+ D I    
Sbjct: 144 HTNPKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTK 203

Query: 587 XXXXXXXTSRWHTK-KLPRKTHKGL-RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 414
                    RW  K +  +   KG+ R V  IG W P  V ++V   GQ GYH RTE NK
Sbjct: 204 GKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNK 263

Query: 413 KIYRIG 396
           +I +IG
Sbjct: 264 RILKIG 269


>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
           Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
           Nanoarchaeum equitans
          Length = 321

 Score = 70.9 bits (166), Expect = 3e-11
 Identities = 42/133 (31%), Positives = 61/133 (45%)
 Frame = -3

Query: 764 TQMXXVKQXXKKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXX 585
           TQ   +K   K   I  I         K+ +A     K + ++ VF + +  D I     
Sbjct: 139 TQPWKIK-LKKTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKG 197

Query: 584 XXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIY 405
                   R+H  +   K+ KG+RKV  IG+  P R+  TV   GQ GYH RTE NK I 
Sbjct: 198 KGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLII 257

Query: 404 RIGQGIHKKDGKV 366
           +IG+ ++ + G V
Sbjct: 258 KIGEPLNVEGGWV 270


>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
           - Candidatus Nitrosopumilus maritimus SCM1
          Length = 331

 Score = 62.5 bits (145), Expect = 1e-08
 Identities = 34/113 (30%), Positives = 50/113 (44%)
 Frame = -3

Query: 734 KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRW 555
           KK +I     + G    +    +E   K I +D +F      D               RW
Sbjct: 156 KKPYIFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRW 215

Query: 554 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 396
           + KK   K+ K +R+V  +G   P  V +TV RAGQ G+H R E +K+I  +G
Sbjct: 216 NVKKKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMG 268


>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
           marine group II euryarchaeote DeepAnt-JyKC7|Rep:
           Ribosomal protein L3 - uncultured marine group II
           euryarchaeote DeepAnt-JyKC7
          Length = 358

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
 Frame = -3

Query: 764 TQMXXVKQXXKKXH-IXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
           TQ   VK    K   I  +    G    K+ WA E     I +D V+   +  D +    
Sbjct: 169 TQPALVKSVPSKTPVIMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITK 228

Query: 587 XXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKI 408
                    R+  K L  K  K  R++  +G +    V  T+ +AGQ GYH RTE+NK+I
Sbjct: 229 GKGWQGVIKRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRI 288

Query: 407 YRI 399
            RI
Sbjct: 289 LRI 291


>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
           Thermoplasmatales|Rep: 50S ribosomal protein L3P -
           Thermoplasma volcanium
          Length = 331

 Score = 59.3 bits (137), Expect = 1e-07
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -3

Query: 734 KKXHIXXIXXNXG-TXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSR 558
           KK  I  +    G + +++  +A  H  K I  +      +  D +             R
Sbjct: 150 KKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQR 209

Query: 557 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 390
           +  K LPRK  K  R +  +G WHP  V  TV +AGQ GY  RT  N ++ +  +G
Sbjct: 210 FGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKG 265


>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 173

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 31/98 (31%), Positives = 49/98 (50%)
 Frame = +3

Query: 432 VMITFLTSTSYSERHPRRMPSSNAGNFPKXXXXXXXXXXXXPTRSDTFVSFALGDTNAVX 611
           +++T LTS+     +   MPS+N  N  +            P+  DT  +   GD+N + 
Sbjct: 1   MVVTVLTSSGNGPVNVSWMPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDIN 60

Query: 612 HFILGKHRIXRDRFLXMFSGPSHFVLXGTPVXXNXXNV 725
           HFIL ++R+ R+ F  +F GP +FV  GT V  +   V
Sbjct: 61  HFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQV 98


>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Methanopyrus kandleri
          Length = 361

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
 Frame = -3

Query: 734 KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRW 555
           KK  +           ++  +A E   + I    VF + E+ D               RW
Sbjct: 161 KKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRW 220

Query: 554 HTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQ 393
                 RKT +    R +  IG   PSRV +TV  AGQ GYH RTE NK+I +IG+
Sbjct: 221 GVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGE 276


>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
           Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
           - Staphylothermus marinus (strain ATCC 43588 / DSM 3639
           / F1)
          Length = 395

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
 Frame = -3

Query: 734 KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRW 555
           KK  I  I    GT  +++ +A +     + VD VF + +  D I             R+
Sbjct: 216 KKPEIIEIKIGGGTLSERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRF 275

Query: 554 HTKKLPR--KTHKGLRKVACIGAWHPSRVSFT-VARAGQKGYHHRTEMNKKIYRIG 396
             K+LPR  K  KG RK   IG+  P   + +   + GQ G+H RTE NK+I +IG
Sbjct: 276 GVKELPRWHKHRKGSRK---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIG 328


>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 335

 Score = 56.8 bits (131), Expect = 6e-07
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
 Frame = -3

Query: 698 GTXEDKVRWAREHXEKP--IPVDSVFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRK-T 528
           GT  D++ +A +  E         VF   E  D               RW  +K   K  
Sbjct: 167 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHA 226

Query: 527 HKGLRK-VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 390
            +G R+ +  +G W+PSRV  TV + GQ GYH RTE+NK++  I  G
Sbjct: 227 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDG 273


>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
           marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
           protein L3 - uncultured marine group II euryarchaeote
           HF70_59C08
          Length = 338

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 33/112 (29%), Positives = 48/112 (42%)
 Frame = -3

Query: 734 KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRW 555
           K   I  +    G    ++ WA E   + + ++ VF      D I             R+
Sbjct: 160 KSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRF 219

Query: 554 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 399
             K L  K  K  R++  +G +    V  T+ +AGQ GYH RTE NK+I RI
Sbjct: 220 GVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKRILRI 271


>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Uncultured methanogenic archaeon RC-I
          Length = 337

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
 Frame = -3

Query: 698 GTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTHKG 519
           G    +  +A+    K + +  VFA  E+ D               RW      RK  + 
Sbjct: 170 GDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIATQKRKHART 229

Query: 518 LRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 396
            +K  V  +G W+P R+ + V + GQ GYH RTE NK+I ++G
Sbjct: 230 GKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMG 272


>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
           symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
           symbiosum
          Length = 328

 Score = 53.2 bits (122), Expect = 7e-06
 Identities = 28/113 (24%), Positives = 48/113 (42%)
 Frame = -3

Query: 734 KKXHIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRW 555
           K+ +I       G+ +++  + ++   K +    V       D               R 
Sbjct: 154 KRPYIFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQRM 213

Query: 554 HTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 396
             K+   K+ K +R++  +G   P  V +TV RAGQ G+H R E NK+I  +G
Sbjct: 214 GAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVG 266


>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
           Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
           pernix
          Length = 344

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = -3

Query: 674 WAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVAC 501
           +A++     I V+ VF + ++ D I             RW  K+LPR  K  KG R+   
Sbjct: 182 YAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRR--- 238

Query: 500 IGAWHPSRVSF-TVARAGQKGYHHRTEMNKKIYRIGQGIHK 381
           IGA    R +F    +AGQ G+H RTE NK+I  I    +K
Sbjct: 239 IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYK 279


>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
           pendens Hrk 5|Rep: 50S ribosomal protein L3 -
           Thermofilum pendens (strain Hrk 5)
          Length = 334

 Score = 50.4 bits (115), Expect = 5e-05
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = -3

Query: 698 GTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPR--KTH 525
           G  E  +  A E   K + +  VF + +  D I             R+  +++PR  K  
Sbjct: 165 GPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHR 224

Query: 524 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKD 375
           KG  ++  +G   P+ + F     GQ G+H RTE NK+I ++G     K+
Sbjct: 225 KGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYNKRILKVGDAESLKE 273


>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
           Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
           solfataricus
          Length = 351

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
 Frame = -3

Query: 764 TQMXXVKQXXKKX-HIXXIXXNXGTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXX 588
           TQ   +    KK   +  I    G  + ++ +A     K I +  VF + ++ D +    
Sbjct: 163 TQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTK 222

Query: 587 XXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNK 414
                    R+   +LPR  K  KG RK+   G       S+T  + GQ G+H RTE NK
Sbjct: 223 GKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNK 280

Query: 413 KIYRIG 396
           +I +IG
Sbjct: 281 RIIKIG 286


>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
           Ribosomal protein L3 - Mus musculus (Mouse)
          Length = 67

 Score = 46.8 bits (106), Expect = 6e-04
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEK 208
           KGC +G KKR++TLRKSL V TKR ALEK
Sbjct: 39  KGCVVGTKKRVLTLRKSLLVQTKRRALEK 67



 Score = 37.9 bits (84), Expect = 0.28
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = -3

Query: 374 GKVIKNNASTEYDLSEKSI 318
           GK+IKNNAST+YDLS+KSI
Sbjct: 1   GKLIKNNASTDYDLSDKSI 19


>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
           Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
           L3P - Ignicoccus hospitalis KIN4/I
          Length = 358

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = -3

Query: 698 GTXEDKVRWAREHXEKPIPVDSVFAQDEMXDCIXXXXXXXXXXXTSRWHTKKLPR--KTH 525
           G+  + + +A+    + + V+ V    +  D I             R+  K+LP+  K  
Sbjct: 191 GSPVEALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKRFGVKELPKWHKHR 250

Query: 524 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 399
           KG R+V    +W     S+ V + GQ GYH RT+ NK++  I
Sbjct: 251 KGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMI 290


>UniRef50_Q7Z5Z5 Cluster: NPC-A-12; n=1; Homo sapiens|Rep: NPC-A-12
           - Homo sapiens (Human)
          Length = 103

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -3

Query: 242 CVCIQRGLH*KRSTSNSLTPRPSSVMVDSRRRLTRLHSWVH 120
           C C + G   +R T +SLTP PS  M  SR    R HSW H
Sbjct: 63  CWCRRSGGLWRRLTLSSLTPPPSLAMAASRPWRRRKHSWDH 103


>UniRef50_Q8IKJ3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 93

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 1   FFFFFFALSNVYFHGLHLRLRSSRWGCGSRSFFA 102
           FFFFFF + N YF+   L L  ++ GCG    FA
Sbjct: 19  FFFFFFVVYNDYFNEPELPLDENKKGCGQFKCFA 52


>UniRef50_Q4Y6V0 Cluster: Putative uncharacterized protein; n=11;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 2145

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = -3

Query: 425 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIKQRLCDD 297
           ++ K   RI   I+KKDGK IK NA  E+D+ +K IK  LC D
Sbjct: 842 KIGKNSNRINM-IYKKDGK-IKKNAYREFDIYDK-IKGILCQD 881


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,761,739
Number of Sequences: 1657284
Number of extensions: 12938480
Number of successful extensions: 31306
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31272
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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